Strain Fitness in Sinorhizobium meliloti 1021 around SMc00108

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,069,975	-				+0.5
1,069,975	-				-1.4
1,070,326	-		SMc00086	0.40	+0.3
1,070,340	+		SMc00086	0.42	-0.0
1,070,349	+		SMc00086	0.43	+0.4
1,070,349	+		SMc00086	0.43	-2.1
1,070,349	+		SMc00086	0.43	-0.3
1,070,349	+		SMc00086	0.43	-0.5
1,070,349	+		SMc00086	0.43	+0.7
1,070,349	+		SMc00086	0.43	+1.7
1,070,350	-		SMc00086	0.43	+0.6
1,070,350	-		SMc00086	0.43	-2.1
1,070,350	-		SMc00086	0.43	-2.5
1,070,350	-		SMc00086	0.43	-2.2
1,070,350	-		SMc00086	0.43	-3.9
1,070,350	-		SMc00086	0.43	+0.2
1,070,451	+		SMc00086	0.54	+0.6
1,070,453	+		SMc00086	0.54	+0.6
1,070,454	-		SMc00086	0.54	+0.8
1,070,454	-		SMc00086	0.54	+0.5
1,070,490	+		SMc00086	0.58	+1.3
1,070,491	-		SMc00086	0.58	+1.1
1,070,553	+		SMc00086	0.65	-2.6
1,070,553	+		SMc00086	0.65	+1.7
1,070,553	+		SMc00086	0.65	+0.2
1,070,554	-		SMc00086	0.65	+0.9
1,070,700	-		SMc00086	0.81	-2.6
1,070,700	-		SMc00086	0.81	-1.0
1,070,845	-				-0.4
1,070,956	-		SMc00108	0.12	-1.3
1,071,004	-		SMc00108	0.21	-2.3
1,071,471	+				+0.1
1,071,509	+				+1.6
1,071,633	+		SMc00109	0.10	-0.0
1,071,633	+		SMc00109	0.10	-0.1
1,071,634	-		SMc00109	0.11	-0.2
1,071,816	-		SMc00109	0.50	-0.7
1,071,880	-		SMc00109	0.63	-0.5
1,071,936	+		SMc00109	0.75	+1.9
1,071,937	-		SMc00109	0.75	+0.5
1,071,939	+		SMc00109	0.76	+1.0
1,071,940	-		SMc00109	0.76	-1.1
1,071,940	-		SMc00109	0.76	+0.2
1,071,994	-		SMc00109	0.88	-2.2
1,071,994	-		SMc00109	0.88	-0.1
1,071,994	-		SMc00109	0.88	+0.5
1,072,019	+				+1.3
1,072,024	+				+0.7
1,072,024	+				-0.1
1,072,025	-				+0.9
1,072,424	+		SMc00047	0.16	-0.1