Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1529 and SMa1531 are separated by 16 nucleotides SMa1531 and SMa1532 overlap by 4 nucleotides SMa1532 and SMa1533 overlap by 13 nucleotides
SMa1529: SMa1529 - NuoD2 NADH I chain D, at 843,074 to 844,288
SMa1529
SMa1531: SMa1531 - NuoC2 NADH I chain C, at 844,305 to 844,853
SMa1531
SMa1532: SMa1532 - NADH dehydrogenase subunit B, at 844,850 to 845,353
SMa1532
SMa1533: SMa1533 - NuoA2 NADH I chain A, at 845,341 to 845,706
SMa1533
Position (kb) 844
845 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 843.391 kb on + strand, within SMa1529 at 843.538 kb on - strand, within SMa1529 at 843.538 kb on - strand, within SMa1529 at 843.655 kb on + strand, within SMa1529 at 843.684 kb on - strand, within SMa1529 at 843.696 kb on + strand, within SMa1529 at 843.719 kb on + strand, within SMa1529 at 843.793 kb on - strand, within SMa1529 at 843.865 kb on - strand, within SMa1529 at 843.895 kb on + strand, within SMa1529 at 843.961 kb on + strand, within SMa1529 at 843.963 kb on + strand, within SMa1529 at 843.964 kb on - strand, within SMa1529 at 843.987 kb on - strand, within SMa1529 at 844.047 kb on + strand, within SMa1529 at 844.125 kb on + strand, within SMa1529 at 844.133 kb on - strand, within SMa1529 at 844.156 kb on - strand, within SMa1529 at 844.156 kb on - strand, within SMa1529 at 844.323 kb on + strand at 844.324 kb on - strand at 844.325 kb on + strand at 844.326 kb on - strand at 844.378 kb on - strand, within SMa1531 at 844.397 kb on - strand, within SMa1531 at 844.453 kb on + strand, within SMa1531 at 844.453 kb on + strand, within SMa1531 at 844.453 kb on + strand, within SMa1531 at 844.495 kb on + strand, within SMa1531 at 844.495 kb on + strand, within SMa1531 at 844.495 kb on + strand, within SMa1531 at 844.495 kb on + strand, within SMa1531 at 844.496 kb on - strand, within SMa1531 at 844.496 kb on - strand, within SMa1531 at 844.500 kb on - strand, within SMa1531 at 844.500 kb on - strand, within SMa1531 at 844.618 kb on + strand, within SMa1531 at 844.618 kb on + strand, within SMa1531 at 844.618 kb on + strand, within SMa1531 at 844.627 kb on + strand, within SMa1531 at 844.627 kb on + strand, within SMa1531 at 844.628 kb on - strand, within SMa1531 at 844.674 kb on + strand, within SMa1531 at 844.674 kb on + strand, within SMa1531 at 844.675 kb on - strand, within SMa1531 at 844.675 kb on - strand, within SMa1531 at 844.765 kb on + strand, within SMa1531 at 844.765 kb on + strand, within SMa1531 at 844.765 kb on + strand, within SMa1531 at 844.766 kb on - strand, within SMa1531 at 844.766 kb on - strand, within SMa1531 at 844.859 kb on + strand at 844.859 kb on + strand at 844.859 kb on + strand at 844.859 kb on + strand at 844.859 kb on + strand at 844.859 kb on + strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.860 kb on - strand at 844.861 kb on + strand at 845.016 kb on + strand, within SMa1532 at 845.016 kb on + strand, within SMa1532 at 845.016 kb on + strand, within SMa1532 at 845.017 kb on - strand, within SMa1532 at 845.017 kb on - strand, within SMa1532 at 845.017 kb on - strand, within SMa1532 at 845.025 kb on + strand, within SMa1532 at 845.025 kb on + strand, within SMa1532 at 845.026 kb on - strand, within SMa1532 at 845.202 kb on + strand, within SMa1532 at 845.318 kb on + strand at 845.318 kb on + strand at 845.318 kb on + strand at 845.319 kb on - strand at 845.379 kb on - strand, within SMa1533 at 845.396 kb on - strand, within SMa1533 at 845.396 kb on - strand, within SMa1533 at 845.509 kb on - strand, within SMa1533 at 845.517 kb on + strand, within SMa1533 at 845.568 kb on + strand, within SMa1533 at 845.580 kb on - strand, within SMa1533 at 845.672 kb on + strand at 845.674 kb on - strand at 845.706 kb on + strand at 845.822 kb on + strand at 845.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 843,391 + SMa1529 0.26 +1.5 843,538 - SMa1529 0.38 -1.4 843,538 - SMa1529 0.38 -0.5 843,655 + SMa1529 0.48 +0.3 843,684 - SMa1529 0.50 -0.0 843,696 + SMa1529 0.51 +0.3 843,719 + SMa1529 0.53 +0.1 843,793 - SMa1529 0.59 +0.0 843,865 - SMa1529 0.65 -0.8 843,895 + SMa1529 0.68 -1.7 843,961 + SMa1529 0.73 -1.6 843,963 + SMa1529 0.73 -0.7 843,964 - SMa1529 0.73 -1.1 843,987 - SMa1529 0.75 +0.8 844,047 + SMa1529 0.80 -1.9 844,125 + SMa1529 0.87 +1.2 844,133 - SMa1529 0.87 -2.0 844,156 - SMa1529 0.89 +0.6 844,156 - SMa1529 0.89 +0.5 844,323 + -2.4 844,324 - -0.7 844,325 + +1.1 844,326 - -0.7 844,378 - SMa1531 0.13 -0.3 844,397 - SMa1531 0.17 +1.2 844,453 + SMa1531 0.27 -2.9 844,453 + SMa1531 0.27 -2.4 844,453 + SMa1531 0.27 -2.3 844,495 + SMa1531 0.35 +3.6 844,495 + SMa1531 0.35 +0.8 844,495 + SMa1531 0.35 -2.7 844,495 + SMa1531 0.35 -0.8 844,496 - SMa1531 0.35 -3.7 844,496 - SMa1531 0.35 +0.3 844,500 - SMa1531 0.36 +0.4 844,500 - SMa1531 0.36 -0.2 844,618 + SMa1531 0.57 -3.4 844,618 + SMa1531 0.57 -2.0 844,618 + SMa1531 0.57 +0.5 844,627 + SMa1531 0.59 -0.7 844,627 + SMa1531 0.59 -0.1 844,628 - SMa1531 0.59 -2.1 844,674 + SMa1531 0.67 +0.3 844,674 + SMa1531 0.67 -1.2 844,675 - SMa1531 0.67 +1.6 844,675 - SMa1531 0.67 -0.6 844,765 + SMa1531 0.84 +1.0 844,765 + SMa1531 0.84 +0.0 844,765 + SMa1531 0.84 -4.8 844,766 - SMa1531 0.84 +1.0 844,766 - SMa1531 0.84 +1.0 844,859 + +0.3 844,859 + +0.3 844,859 + -0.6 844,859 + +0.7 844,859 + +0.0 844,859 + +1.5 844,860 - -0.3 844,860 - -0.5 844,860 - -0.8 844,860 - -1.8 844,860 - +0.5 844,860 - -0.3 844,860 - -0.5 844,860 - +0.4 844,860 - +0.1 844,861 + +2.0 845,016 + SMa1532 0.33 +1.2 845,016 + SMa1532 0.33 +1.0 845,016 + SMa1532 0.33 -0.2 845,017 - SMa1532 0.33 +0.3 845,017 - SMa1532 0.33 -1.0 845,017 - SMa1532 0.33 +2.2 845,025 + SMa1532 0.35 +0.8 845,025 + SMa1532 0.35 +0.2 845,026 - SMa1532 0.35 -1.3 845,202 + SMa1532 0.70 -0.4 845,318 + -0.1 845,318 + +1.3 845,318 + -0.1 845,319 - -2.3 845,379 - SMa1533 0.10 -2.9 845,396 - SMa1533 0.15 +1.5 845,396 - SMa1533 0.15 -0.0 845,509 - SMa1533 0.46 +0.5 845,517 + SMa1533 0.48 -1.6 845,568 + SMa1533 0.62 +2.1 845,580 - SMa1533 0.65 -2.1 845,672 + -1.4 845,674 - +0.1 845,706 + +0.5 845,822 + -0.8 845,823 - +0.6
Or see this region's nucleotide sequence