Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1358 and SMa1361 are separated by 320 nucleotides SMa1361 and SMa1362 are separated by 408 nucleotides SMa1362 and SMa1363 overlap by 4 nucleotides
SMa1358: SMa1358 - Lyase, at 744,913 to 745,287
SMa1358
SMa1361: SMa1361 - hypothetical protein, at 745,608 to 745,790
SMa1361
SMa1362: SMa1362 - inner-membrane permease, at 746,199 to 747,599
SMa1362
SMa1363: SMa1363 - ABC transporter permease, at 747,596 to 748,684
SMa1363
Position (kb) 746
747
748 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 745.205 kb on - strand, within SMa1358 at 745.217 kb on - strand, within SMa1358 at 745.217 kb on - strand, within SMa1358 at 745.217 kb on - strand, within SMa1358 at 745.219 kb on + strand, within SMa1358 at 745.220 kb on - strand, within SMa1358 at 745.220 kb on - strand, within SMa1358 at 745.220 kb on - strand, within SMa1358 at 745.325 kb on + strand at 745.325 kb on + strand at 745.325 kb on + strand at 745.325 kb on + strand at 745.326 kb on - strand at 745.326 kb on - strand at 745.326 kb on - strand at 745.467 kb on + strand at 745.563 kb on - strand at 745.581 kb on - strand at 745.591 kb on - strand at 745.609 kb on + strand at 745.610 kb on - strand at 745.729 kb on + strand, within SMa1361 at 745.729 kb on + strand, within SMa1361 at 745.730 kb on - strand, within SMa1361 at 745.773 kb on - strand at 745.773 kb on - strand at 745.870 kb on + strand at 745.870 kb on + strand at 745.871 kb on - strand at 745.956 kb on + strand at 745.957 kb on - strand at 745.957 kb on - strand at 746.140 kb on - strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.200 kb on + strand at 746.340 kb on + strand, within SMa1362 at 746.341 kb on - strand, within SMa1362 at 746.487 kb on - strand, within SMa1362 at 746.488 kb on + strand, within SMa1362 at 746.488 kb on + strand, within SMa1362 at 746.489 kb on - strand, within SMa1362 at 746.535 kb on + strand, within SMa1362 at 746.607 kb on + strand, within SMa1362 at 746.607 kb on + strand, within SMa1362 at 746.654 kb on - strand, within SMa1362 at 746.813 kb on + strand, within SMa1362 at 746.814 kb on - strand, within SMa1362 at 746.871 kb on + strand, within SMa1362 at 746.884 kb on + strand, within SMa1362 at 747.024 kb on - strand, within SMa1362 at 747.044 kb on + strand, within SMa1362 at 747.045 kb on - strand, within SMa1362 at 747.045 kb on - strand, within SMa1362 at 747.061 kb on + strand, within SMa1362 at 747.062 kb on - strand, within SMa1362 at 747.182 kb on - strand, within SMa1362 at 747.257 kb on + strand, within SMa1362 at 747.257 kb on + strand, within SMa1362 at 747.258 kb on - strand, within SMa1362 at 747.278 kb on - strand, within SMa1362 at 747.397 kb on + strand, within SMa1362 at 747.442 kb on - strand, within SMa1362 at 747.444 kb on - strand, within SMa1362 at 747.444 kb on - strand, within SMa1362 at 747.499 kb on + strand at 747.499 kb on + strand at 747.500 kb on - strand at 747.501 kb on + strand at 747.652 kb on + strand at 747.653 kb on - strand at 747.653 kb on - strand at 747.730 kb on - strand, within SMa1363 at 747.735 kb on + strand, within SMa1363 at 747.736 kb on - strand, within SMa1363 at 747.738 kb on + strand, within SMa1363 at 747.779 kb on + strand, within SMa1363 at 747.806 kb on + strand, within SMa1363 at 747.807 kb on - strand, within SMa1363 at 747.807 kb on - strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.869 kb on + strand, within SMa1363 at 747.870 kb on - strand, within SMa1363 at 747.921 kb on + strand, within SMa1363 at 747.922 kb on - strand, within SMa1363 at 747.924 kb on - strand, within SMa1363 at 747.998 kb on + strand, within SMa1363 at 748.052 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.072 kb on + strand, within SMa1363 at 748.183 kb on - strand, within SMa1363 at 748.183 kb on - strand, within SMa1363 at 748.522 kb on - strand, within SMa1363
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 745,205 - SMa1358 0.78 -0.4 745,217 - SMa1358 0.81 -3.0 745,217 - SMa1358 0.81 -1.1 745,217 - SMa1358 0.81 +0.1 745,219 + SMa1358 0.82 +1.1 745,220 - SMa1358 0.82 -0.1 745,220 - SMa1358 0.82 +0.0 745,220 - SMa1358 0.82 -0.4 745,325 + +0.6 745,325 + +1.4 745,325 + -5.7 745,325 + -0.3 745,326 - +0.9 745,326 - -0.5 745,326 - -0.6 745,467 + +1.3 745,563 - -0.7 745,581 - +0.2 745,591 - -0.0 745,609 + -0.2 745,610 - +2.0 745,729 + SMa1361 0.66 +0.8 745,729 + SMa1361 0.66 -0.9 745,730 - SMa1361 0.67 +0.3 745,773 - +1.9 745,773 - +0.3 745,870 + +0.8 745,870 + +0.2 745,871 - -3.9 745,956 + +2.0 745,957 - +1.0 745,957 - -0.6 746,140 - +1.4 746,200 + -0.3 746,200 + +1.6 746,200 + -0.8 746,200 + -2.2 746,200 + +0.9 746,340 + SMa1362 0.10 +0.2 746,341 - SMa1362 0.10 -0.4 746,487 - SMa1362 0.21 -0.5 746,488 + SMa1362 0.21 +0.2 746,488 + SMa1362 0.21 -0.8 746,489 - SMa1362 0.21 +0.7 746,535 + SMa1362 0.24 -1.4 746,607 + SMa1362 0.29 +0.3 746,607 + SMa1362 0.29 -0.3 746,654 - SMa1362 0.32 -0.4 746,813 + SMa1362 0.44 -2.6 746,814 - SMa1362 0.44 -2.2 746,871 + SMa1362 0.48 -1.9 746,884 + SMa1362 0.49 -3.7 747,024 - SMa1362 0.59 -1.3 747,044 + SMa1362 0.60 -0.2 747,045 - SMa1362 0.60 -0.0 747,045 - SMa1362 0.60 +0.6 747,061 + SMa1362 0.62 -0.2 747,062 - SMa1362 0.62 -0.4 747,182 - SMa1362 0.70 +0.0 747,257 + SMa1362 0.76 -0.2 747,257 + SMa1362 0.76 +0.4 747,258 - SMa1362 0.76 +1.1 747,278 - SMa1362 0.77 -2.0 747,397 + SMa1362 0.86 -2.3 747,442 - SMa1362 0.89 +0.4 747,444 - SMa1362 0.89 +0.2 747,444 - SMa1362 0.89 +0.3 747,499 + +0.6 747,499 + +0.9 747,500 - +1.4 747,501 + +0.1 747,652 + -1.5 747,653 - +1.2 747,653 - +1.5 747,730 - SMa1363 0.12 +0.5 747,735 + SMa1363 0.13 -0.4 747,736 - SMa1363 0.13 +1.1 747,738 + SMa1363 0.13 +0.3 747,779 + SMa1363 0.17 -0.6 747,806 + SMa1363 0.19 +0.1 747,807 - SMa1363 0.19 -0.5 747,807 - SMa1363 0.19 +0.9 747,869 + SMa1363 0.25 +0.3 747,869 + SMa1363 0.25 +0.4 747,869 + SMa1363 0.25 +1.7 747,869 + SMa1363 0.25 -0.9 747,869 + SMa1363 0.25 -0.4 747,870 - SMa1363 0.25 -0.4 747,921 + SMa1363 0.30 -1.0 747,922 - SMa1363 0.30 -1.3 747,924 - SMa1363 0.30 -2.3 747,998 + SMa1363 0.37 -1.8 748,052 + SMa1363 0.42 -1.8 748,072 + SMa1363 0.44 +0.4 748,072 + SMa1363 0.44 -0.4 748,072 + SMa1363 0.44 -0.8 748,072 + SMa1363 0.44 -1.0 748,072 + SMa1363 0.44 +0.5 748,183 - SMa1363 0.54 +0.1 748,183 - SMa1363 0.54 -1.3 748,522 - SMa1363 0.85 -0.6
Or see this region's nucleotide sequence