Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0907 and SMa0909 are separated by 334 nucleotides SMa0909 and SMa0911 are separated by 5 nucleotides
SMa0907: SMa0907 - hypothetical protein, at 504,976 to 506,214
SMa0907
SMa0909: SMa0909 - hypothetical protein, at 506,549 to 507,442
SMa0909
SMa0911: SMa0911 - hypothetical protein, at 507,448 to 508,479
SMa0911
Position (kb) 506
507
508 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 505.768 kb on + strand, within SMa0907 at 505.955 kb on + strand, within SMa0907 at 505.955 kb on + strand, within SMa0907 at 505.955 kb on + strand, within SMa0907 at 505.956 kb on - strand, within SMa0907 at 506.012 kb on + strand at 506.012 kb on + strand, within SMa0907 at 506.013 kb on - strand, within SMa0907 at 506.013 kb on - strand, within SMa0907 at 506.034 kb on + strand, within SMa0907 at 506.034 kb on + strand, within SMa0907 at 506.035 kb on - strand, within SMa0907 at 506.036 kb on + strand, within SMa0907 at 506.036 kb on - strand, within SMa0907 at 506.170 kb on + strand at 506.170 kb on + strand at 506.171 kb on - strand at 506.254 kb on - strand at 506.318 kb on - strand at 506.992 kb on - strand, within SMa0909 at 506.992 kb on - strand, within SMa0909 at 507.511 kb on + strand at 507.511 kb on + strand at 507.511 kb on + strand at 507.542 kb on - strand at 507.542 kb on - strand at 507.586 kb on + strand, within SMa0911 at 507.586 kb on + strand, within SMa0911 at 507.586 kb on + strand, within SMa0911 at 507.586 kb on + strand, within SMa0911 at 507.587 kb on - strand, within SMa0911 at 507.587 kb on - strand, within SMa0911 at 507.859 kb on + strand, within SMa0911 at 507.859 kb on + strand, within SMa0911 at 507.860 kb on - strand, within SMa0911 at 507.860 kb on - strand at 507.860 kb on - strand, within SMa0911 at 507.860 kb on - strand, within SMa0911 at 507.928 kb on + strand, within SMa0911 at 507.957 kb on + strand, within SMa0911 at 507.958 kb on - strand, within SMa0911 at 507.958 kb on - strand, within SMa0911 at 508.271 kb on - strand, within SMa0911 at 508.340 kb on + strand, within SMa0911 at 508.340 kb on + strand at 508.341 kb on - strand, within SMa0911 at 508.344 kb on + strand, within SMa0911 at 508.345 kb on - strand, within SMa0911 at 508.345 kb on - strand, within SMa0911 at 508.345 kb on - strand, within SMa0911 at 508.349 kb on + strand, within SMa0911 at 508.349 kb on + strand, within SMa0911
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 505,768 + SMa0907 0.64 +2.0 505,955 + SMa0907 0.79 -1.7 505,955 + SMa0907 0.79 +0.7 505,955 + SMa0907 0.79 -0.5 505,956 - SMa0907 0.79 -0.1 506,012 + -0.7 506,012 + SMa0907 0.84 -0.7 506,013 - SMa0907 0.84 +1.2 506,013 - SMa0907 0.84 -0.7 506,034 + SMa0907 0.85 +0.1 506,034 + SMa0907 0.85 -1.3 506,035 - SMa0907 0.85 -0.6 506,036 + SMa0907 0.86 +0.1 506,036 - SMa0907 0.86 +0.3 506,170 + +0.6 506,170 + -0.0 506,171 - +0.2 506,254 - +0.7 506,318 - -2.1 506,992 - SMa0909 0.50 -0.6 506,992 - SMa0909 0.50 -3.0 507,511 + -1.5 507,511 + -0.2 507,511 + +0.5 507,542 - -0.9 507,542 - -0.5 507,586 + SMa0911 0.13 +0.0 507,586 + SMa0911 0.13 -0.6 507,586 + SMa0911 0.13 +0.4 507,586 + SMa0911 0.13 +0.0 507,587 - SMa0911 0.13 +0.6 507,587 - SMa0911 0.13 +0.8 507,859 + SMa0911 0.40 -0.9 507,859 + SMa0911 0.40 +0.3 507,860 - SMa0911 0.40 +1.4 507,860 - -0.1 507,860 - SMa0911 0.40 +1.1 507,860 - SMa0911 0.40 +1.7 507,928 + SMa0911 0.47 -0.9 507,957 + SMa0911 0.49 -0.4 507,958 - SMa0911 0.49 +0.3 507,958 - SMa0911 0.49 -2.0 508,271 - SMa0911 0.80 -0.9 508,340 + SMa0911 0.86 +0.7 508,340 + -1.7 508,341 - SMa0911 0.87 +2.0 508,344 + SMa0911 0.87 +0.1 508,345 - SMa0911 0.87 -0.7 508,345 - SMa0911 0.87 +0.7 508,345 - SMa0911 0.87 +1.0 508,349 + SMa0911 0.87 -0.4 508,349 + SMa0911 0.87 -0.7
Or see this region's nucleotide sequence