Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0753 and SMa0754 are separated by 283 nucleotides
SMa0753: SMa0753 - hypothetical protein, at 406,804 to 407,496
SMa0753
SMa0754: SMa0754 - hypothetical protein, at 407,780 to 408,106
SMa0754
Position (kb)
407
408
409 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 406.930 kb on - strand, within SMa0753 at 407.543 kb on + strand at 407.543 kb on + strand at 407.543 kb on + strand at 407.595 kb on + strand at 407.595 kb on + strand at 407.595 kb on + strand at 407.596 kb on - strand at 407.596 kb on - strand at 407.596 kb on - strand at 407.600 kb on - strand at 407.600 kb on - strand at 407.600 kb on - strand at 407.600 kb on - strand at 407.646 kb on + strand at 407.646 kb on + strand at 407.646 kb on + strand at 407.646 kb on + strand at 407.647 kb on - strand at 407.647 kb on - strand at 407.647 kb on - strand at 407.961 kb on - strand, within SMa0754 at 408.035 kb on - strand, within SMa0754 at 408.195 kb on + strand at 408.275 kb on + strand at 408.308 kb on + strand at 408.309 kb on - strand at 408.386 kb on - strand at 408.475 kb on + strand at 408.476 kb on - strand at 408.501 kb on - strand at 408.508 kb on + strand at 408.508 kb on + strand at 408.508 kb on + strand at 408.526 kb on + strand at 408.551 kb on - strand at 408.551 kb on - strand at 408.551 kb on - strand at 408.583 kb on + strand at 408.644 kb on - strand at 408.644 kb on - strand at 408.875 kb on + strand at 408.884 kb on - strand at 408.884 kb on - strand at 408.886 kb on + strand at 408.887 kb on - strand at 408.908 kb on - strand at 408.925 kb on + strand at 408.998 kb on + strand at 408.999 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 406,930 - SMa0753 0.18 -2.1 407,543 + -0.3 407,543 + +1.3 407,543 + -0.1 407,595 + -3.6 407,595 + +0.4 407,595 + -2.1 407,596 - +0.7 407,596 - +1.5 407,596 - +0.3 407,600 - +0.6 407,600 - -0.8 407,600 - +0.3 407,600 - +1.2 407,646 + +1.5 407,646 + -2.1 407,646 + +0.7 407,646 + -0.6 407,647 - +0.6 407,647 - +0.0 407,647 - -2.1 407,961 - SMa0754 0.55 +0.9 408,035 - SMa0754 0.78 +1.7 408,195 + -0.3 408,275 + +0.5 408,308 + +1.4 408,309 - +0.6 408,386 - -2.5 408,475 + -1.5 408,476 - +1.2 408,501 - -2.5 408,508 + +1.9 408,508 + +1.1 408,508 + +3.7 408,526 + -1.0 408,551 - +0.4 408,551 - +0.1 408,551 - -0.7 408,583 + -0.6 408,644 - -0.2 408,644 - +1.5 408,875 + +0.3 408,884 - +0.6 408,884 - -0.2 408,886 + -1.4 408,887 - +0.5 408,908 - +1.4 408,925 + -0.6 408,998 + -0.8 408,999 - +1.2
Or see this region's nucleotide sequence