Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21489
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,410,629 | + | SM_b21488 | 0.57 | -2.0 | |
1,410,630 | - | SM_b21488 | 0.57 | -2.3 | |
1,410,658 | + | SM_b21488 | 0.58 | -1.0 | |
1,410,658 | + | SM_b21488 | 0.58 | +0.2 | |
1,410,658 | + | SM_b21488 | 0.58 | -2.0 | |
1,410,911 | + | SM_b21488 | 0.71 | -2.2 | |
1,410,911 | + | SM_b21488 | 0.71 | -3.4 | |
1,411,166 | + | SM_b21488 | 0.83 | +0.7 | |
1,411,216 | + | SM_b21488 | 0.86 | -5.0 | |
1,411,256 | - | SM_b21488 | 0.88 | +1.2 | |
1,411,256 | - | SM_b21488 | 0.88 | -2.7 | |
1,411,256 | - | SM_b21488 | 0.88 | -0.4 | |
1,411,341 | - | +0.2 | |||
1,411,410 | - | -4.0 | |||
1,411,550 | - | +0.0 | |||
1,411,603 | + | SM_b21489 | 0.17 | -3.1 | |
1,411,603 | + | SM_b21489 | 0.17 | -0.6 | |
1,411,604 | - | SM_b21489 | 0.17 | -2.4 | |
1,411,669 | + | SM_b21489 | 0.27 | -5.6 | |
1,411,787 | - | SM_b21489 | 0.46 | -3.1 | |
1,412,105 | - | -2.7 | |||
1,412,566 | + | -3.9 | |||
1,412,567 | - | +0.3 | |||
1,412,632 | + | +0.6 | |||
1,412,946 | + | SM_b21490 | 0.38 | -2.1 |
Or see this region's nucleotide sequence