Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21301 and SM_b21302 are separated by 124 nucleotides SM_b21302 and SM_b21303 are separated by 20 nucleotides SM_b21303 and SM_b21304 are separated by 33 nucleotides
SM_b21301: SM_b21301 - ly membrane-anchored aldehyde dehydrogenase, at 882,510 to 884,894
_b21301
SM_b21302: SM_b21302 - hypothetical protein, at 885,019 to 885,474
_b21302
SM_b21303: SM_b21303 - hypothetical protein, at 885,495 to 885,923
_b21303
SM_b21304: SM_b21304 - NG,NG-dimethylarginine dimethylaminohydrolase (dimethylargininase) protein, at 885,957 to 886,751
_b21304
Position (kb) 885
886 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 884.257 kb on - strand, within SM_b21301 at 884.257 kb on - strand, within SM_b21301 at 884.259 kb on + strand, within SM_b21301 at 884.259 kb on + strand, within SM_b21301 at 884.260 kb on - strand, within SM_b21301 at 884.260 kb on - strand, within SM_b21301 at 884.260 kb on - strand, within SM_b21301 at 884.382 kb on + strand, within SM_b21301 at 884.403 kb on + strand, within SM_b21301 at 884.601 kb on + strand, within SM_b21301 at 884.602 kb on - strand, within SM_b21301 at 884.646 kb on - strand, within SM_b21301 at 884.646 kb on - strand, within SM_b21301 at 884.777 kb on + strand at 884.778 kb on - strand at 884.892 kb on + strand at 885.031 kb on - strand at 885.347 kb on - strand, within SM_b21302 at 885.370 kb on + strand, within SM_b21302 at 885.370 kb on + strand, within SM_b21302 at 885.425 kb on - strand, within SM_b21302 at 885.487 kb on + strand at 885.541 kb on + strand, within SM_b21303 at 885.645 kb on + strand, within SM_b21303 at 885.645 kb on + strand, within SM_b21303 at 885.645 kb on + strand, within SM_b21303 at 885.646 kb on - strand, within SM_b21303 at 885.646 kb on - strand, within SM_b21303 at 885.646 kb on - strand, within SM_b21303 at 885.728 kb on + strand, within SM_b21303 at 885.729 kb on - strand, within SM_b21303 at 885.729 kb on - strand, within SM_b21303 at 885.905 kb on - strand at 885.905 kb on - strand at 886.056 kb on + strand, within SM_b21304 at 886.057 kb on - strand, within SM_b21304 at 886.086 kb on + strand, within SM_b21304 at 886.086 kb on + strand, within SM_b21304 at 886.087 kb on - strand, within SM_b21304
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 884,257 - SM_b21301 0.73 +0.3 884,257 - SM_b21301 0.73 -0.1 884,259 + SM_b21301 0.73 +0.1 884,259 + SM_b21301 0.73 -0.1 884,260 - SM_b21301 0.73 -1.7 884,260 - SM_b21301 0.73 -1.8 884,260 - SM_b21301 0.73 +0.5 884,382 + SM_b21301 0.78 -0.1 884,403 + SM_b21301 0.79 +0.7 884,601 + SM_b21301 0.88 +1.5 884,602 - SM_b21301 0.88 -0.9 884,646 - SM_b21301 0.90 -1.5 884,646 - SM_b21301 0.90 -1.2 884,777 + +0.8 884,778 - -0.2 884,892 + +0.6 885,031 - -0.2 885,347 - SM_b21302 0.72 +0.5 885,370 + SM_b21302 0.77 -1.6 885,370 + SM_b21302 0.77 -0.6 885,425 - SM_b21302 0.89 +1.9 885,487 + -1.9 885,541 + SM_b21303 0.11 -1.7 885,645 + SM_b21303 0.35 -1.0 885,645 + SM_b21303 0.35 +0.6 885,645 + SM_b21303 0.35 -0.3 885,646 - SM_b21303 0.35 -1.9 885,646 - SM_b21303 0.35 -1.0 885,646 - SM_b21303 0.35 +0.3 885,728 + SM_b21303 0.54 -0.5 885,729 - SM_b21303 0.55 -0.3 885,729 - SM_b21303 0.55 -2.5 885,905 - -0.0 885,905 - -3.4 886,056 + SM_b21304 0.12 -1.1 886,057 - SM_b21304 0.13 +0.4 886,086 + SM_b21304 0.16 +1.1 886,086 + SM_b21304 0.16 +4.1 886,087 - SM_b21304 0.16 +0.2
Or see this region's nucleotide sequence