Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21169 and SM_b21170 are separated by 19 nucleotides SM_b21170 and SM_b21171 overlap by 4 nucleotides SM_b21171 and SM_b21172 overlap by 35 nucleotides SM_b21172 and SM_b21173 are separated by 79 nucleotides
SM_b21169: SM_b21169 - ArsR family transcriptional regulator, at 916,402 to 916,827
_b21169
SM_b21170: SM_b21170 - guanylate kinase, at 916,847 to 917,434
_b21170
SM_b21171: SM_b21171 - enzyme protein, at 917,431 to 918,570
_b21171
SM_b21172: SM_b21172 - hypothetical protein, at 918,536 to 919,345
_b21172
SM_b21173: SM_b21173 - hypothetical protein, at 919,425 to 919,616
_b21173
Position (kb) 917
918
919 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 916.442 kb on + strand at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.506 kb on - strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.615 kb on - strand, within SM_b21169 at 916.621 kb on + strand, within SM_b21169 at 916.621 kb on + strand, within SM_b21169 at 916.622 kb on - strand at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.659 kb on + strand, within SM_b21169 at 916.660 kb on - strand, within SM_b21169 at 916.660 kb on - strand, within SM_b21169 at 916.743 kb on + strand, within SM_b21169 at 916.867 kb on + strand at 916.867 kb on + strand at 917.081 kb on - strand, within SM_b21170 at 917.127 kb on - strand, within SM_b21170 at 917.181 kb on + strand, within SM_b21170 at 917.182 kb on - strand, within SM_b21170 at 917.182 kb on - strand, within SM_b21170 at 917.476 kb on + strand at 917.477 kb on - strand at 917.660 kb on + strand, within SM_b21171 at 917.745 kb on + strand, within SM_b21171 at 917.945 kb on + strand, within SM_b21171 at 917.945 kb on + strand, within SM_b21171 at 918.021 kb on - strand, within SM_b21171 at 918.024 kb on - strand, within SM_b21171 at 918.033 kb on - strand, within SM_b21171 at 918.033 kb on - strand, within SM_b21171 at 918.122 kb on + strand, within SM_b21171 at 918.122 kb on + strand, within SM_b21171 at 918.122 kb on + strand, within SM_b21171 at 918.428 kb on + strand, within SM_b21171 at 918.429 kb on - strand, within SM_b21171 at 918.760 kb on + strand, within SM_b21172 at 918.761 kb on - strand, within SM_b21172 at 918.795 kb on + strand, within SM_b21172 at 918.796 kb on - strand, within SM_b21172 at 918.802 kb on - strand, within SM_b21172 at 918.996 kb on + strand, within SM_b21172 at 919.157 kb on + strand, within SM_b21172 at 919.157 kb on + strand, within SM_b21172 at 919.272 kb on + strand at 919.501 kb on + strand, within SM_b21173 at 919.502 kb on - strand, within SM_b21173 at 919.517 kb on + strand, within SM_b21173
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 916,442 + -0.3 916,505 + SM_b21169 0.24 -1.0 916,505 + SM_b21169 0.24 -4.1 916,505 + SM_b21169 0.24 +0.5 916,505 + SM_b21169 0.24 -0.2 916,506 - SM_b21169 0.24 -0.5 916,614 + SM_b21169 0.50 +0.5 916,614 + SM_b21169 0.50 -0.0 916,614 + SM_b21169 0.50 +0.6 916,615 - SM_b21169 0.50 +1.8 916,621 + SM_b21169 0.51 -0.4 916,621 + SM_b21169 0.51 -1.8 916,622 - +0.1 916,622 - SM_b21169 0.52 +0.4 916,622 - SM_b21169 0.52 -2.1 916,622 - +2.3 916,622 - SM_b21169 0.52 -0.5 916,622 - SM_b21169 0.52 +1.1 916,622 - SM_b21169 0.52 -1.2 916,659 + SM_b21169 0.60 +0.1 916,660 - SM_b21169 0.61 +1.0 916,660 - SM_b21169 0.61 +1.1 916,743 + SM_b21169 0.80 -0.5 916,867 + +1.1 916,867 + -2.4 917,081 - SM_b21170 0.40 +0.0 917,127 - SM_b21170 0.48 +0.7 917,181 + SM_b21170 0.57 +0.7 917,182 - SM_b21170 0.57 +2.6 917,182 - SM_b21170 0.57 +0.1 917,476 + -0.5 917,477 - +1.5 917,660 + SM_b21171 0.20 +1.9 917,745 + SM_b21171 0.28 +1.8 917,945 + SM_b21171 0.45 +0.2 917,945 + SM_b21171 0.45 -1.7 918,021 - SM_b21171 0.52 +0.6 918,024 - SM_b21171 0.52 -0.1 918,033 - SM_b21171 0.53 +1.1 918,033 - SM_b21171 0.53 +1.2 918,122 + SM_b21171 0.61 +1.0 918,122 + SM_b21171 0.61 +1.6 918,122 + SM_b21171 0.61 +0.6 918,428 + SM_b21171 0.87 +1.7 918,429 - SM_b21171 0.88 -4.3 918,760 + SM_b21172 0.28 -0.3 918,761 - SM_b21172 0.28 +0.6 918,795 + SM_b21172 0.32 +0.4 918,796 - SM_b21172 0.32 -3.4 918,802 - SM_b21172 0.33 -3.1 918,996 + SM_b21172 0.57 +0.4 919,157 + SM_b21172 0.77 +1.1 919,157 + SM_b21172 0.77 +1.8 919,272 + -2.1 919,501 + SM_b21173 0.40 -2.1 919,502 - SM_b21173 0.40 +0.1 919,517 + SM_b21173 0.48 -4.1
Or see this region's nucleotide sequence