Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21035 and SM_b21036 are separated by 138 nucleotides SM_b21036 and SM_b21037 are separated by 162 nucleotides
SM_b21035: SM_b21035 - hypothetical protein, at 653,580 to 653,798
_b21035
SM_b21036: SM_b21036 - hypothetical protein, at 653,937 to 654,485
_b21036
SM_b21037: SM_b21037 - oligopeptidemurein peptide ABC transporter substrate-binding protein precursor, at 654,648 to 656,243
_b21037
Position (kb) 653
654
655 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 652.944 kb on + strand at 652.944 kb on + strand at 652.945 kb on - strand at 652.964 kb on - strand at 653.020 kb on + strand at 653.047 kb on - strand at 653.047 kb on - strand at 653.104 kb on + strand at 653.105 kb on - strand at 653.259 kb on - strand at 653.352 kb on + strand at 653.353 kb on - strand at 653.353 kb on - strand at 653.353 kb on - strand at 653.353 kb on - strand at 653.353 kb on - strand at 653.364 kb on + strand at 653.364 kb on + strand at 653.364 kb on + strand at 653.365 kb on - strand at 653.365 kb on - strand at 653.372 kb on + strand at 653.373 kb on - strand at 653.438 kb on + strand at 653.458 kb on + strand at 653.459 kb on - strand at 653.459 kb on - strand at 653.488 kb on + strand at 653.489 kb on - strand at 653.494 kb on - strand at 653.581 kb on + strand at 653.581 kb on + strand at 653.672 kb on + strand, within SM_b21035 at 653.673 kb on - strand, within SM_b21035 at 653.673 kb on - strand, within SM_b21035 at 653.771 kb on + strand, within SM_b21035 at 653.772 kb on - strand, within SM_b21035 at 653.772 kb on - strand, within SM_b21035 at 653.954 kb on + strand at 653.954 kb on + strand at 653.954 kb on + strand at 653.954 kb on + strand at 653.992 kb on - strand, within SM_b21036 at 654.533 kb on + strand at 654.533 kb on + strand at 654.533 kb on + strand at 654.534 kb on - strand at 654.534 kb on - strand at 654.541 kb on + strand at 654.542 kb on - strand at 654.542 kb on - strand at 654.621 kb on - strand at 654.762 kb on - strand at 654.768 kb on + strand at 654.768 kb on + strand at 654.769 kb on - strand at 654.769 kb on - strand at 654.795 kb on + strand at 654.796 kb on - strand at 654.833 kb on + strand, within SM_b21037 at 654.833 kb on + strand, within SM_b21037 at 654.834 kb on - strand, within SM_b21037 at 654.838 kb on - strand, within SM_b21037 at 654.852 kb on + strand, within SM_b21037 at 655.047 kb on + strand, within SM_b21037 at 655.048 kb on - strand, within SM_b21037 at 655.230 kb on + strand, within SM_b21037 at 655.230 kb on + strand, within SM_b21037 at 655.287 kb on + strand, within SM_b21037 at 655.287 kb on + strand, within SM_b21037 at 655.319 kb on + strand, within SM_b21037 at 655.320 kb on - strand, within SM_b21037 at 655.475 kb on - strand, within SM_b21037
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 652,944 + +0.1 652,944 + -1.2 652,945 - -0.7 652,964 - +1.1 653,020 + -2.3 653,047 - -1.1 653,047 - +0.1 653,104 + -0.5 653,105 - -1.2 653,259 - +1.3 653,352 + -0.6 653,353 - +0.4 653,353 - +0.3 653,353 - +0.2 653,353 - +0.4 653,353 - +0.1 653,364 + -1.1 653,364 + -0.5 653,364 + +0.5 653,365 - +0.5 653,365 - +2.7 653,372 + +0.4 653,373 - -0.0 653,438 + -1.2 653,458 + +3.0 653,459 - +0.1 653,459 - -0.0 653,488 + +0.4 653,489 - -1.4 653,494 - +0.2 653,581 + +1.2 653,581 + -0.7 653,672 + SM_b21035 0.42 -1.8 653,673 - SM_b21035 0.42 +0.0 653,673 - SM_b21035 0.42 +0.3 653,771 + SM_b21035 0.87 +1.1 653,772 - SM_b21035 0.88 +1.2 653,772 - SM_b21035 0.88 +0.0 653,954 + +2.1 653,954 + +0.7 653,954 + +0.0 653,954 + -1.7 653,992 - SM_b21036 0.10 -1.0 654,533 + -0.9 654,533 + +1.0 654,533 + +0.7 654,534 - -1.4 654,534 - -1.3 654,541 + +1.3 654,542 - -0.9 654,542 - -1.5 654,621 - -0.2 654,762 - -0.1 654,768 + -2.7 654,768 + +0.5 654,769 - +1.1 654,769 - -2.5 654,795 + -0.4 654,796 - -3.4 654,833 + SM_b21037 0.12 -1.7 654,833 + SM_b21037 0.12 -3.5 654,834 - SM_b21037 0.12 +3.2 654,838 - SM_b21037 0.12 +0.9 654,852 + SM_b21037 0.13 -1.2 655,047 + SM_b21037 0.25 -2.4 655,048 - SM_b21037 0.25 -1.9 655,230 + SM_b21037 0.36 -0.2 655,230 + SM_b21037 0.36 +0.5 655,287 + SM_b21037 0.40 +0.9 655,287 + SM_b21037 0.40 -0.3 655,319 + SM_b21037 0.42 +1.4 655,320 - SM_b21037 0.42 -0.8 655,475 - SM_b21037 0.52 -0.1
Or see this region's nucleotide sequence