Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20966

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,193,265	+		SM_b20965	0.13	+0.5
1,193,265	+		SM_b20965	0.13	+0.3
1,193,266	-		SM_b20965	0.13	-0.1
1,193,266	-		SM_b20965	0.13	-1.9
1,193,269	+		SM_b20965	0.13	+1.3
1,193,269	+		SM_b20965	0.13	+1.2
1,193,269	+		SM_b20965	0.13	-1.2
1,193,269	+		SM_b20965	0.13	-3.5
1,193,270	-		SM_b20965	0.13	+2.2
1,193,287	+		SM_b20965	0.15	+0.4
1,193,288	-		SM_b20965	0.15	-0.2
1,193,288	-		SM_b20965	0.15	+0.3
1,193,299	+		SM_b20965	0.16	-1.9
1,193,299	+		SM_b20965	0.16	-1.9
1,193,300	-		SM_b20965	0.16	-0.4
1,193,302	+		SM_b20965	0.16	+0.9
1,193,303	-		SM_b20965	0.16	-3.6
1,193,303	-		SM_b20965	0.16	+1.3
1,193,342	-		SM_b20965	0.20	-1.7
1,193,347	+		SM_b20965	0.21	+0.9
1,193,360	+		SM_b20965	0.22	-1.7
1,193,453	-		SM_b20965	0.31	-0.5
1,193,512	+		SM_b20965	0.37	+0.6
1,193,513	-		SM_b20965	0.37	+0.3
1,193,513	-		SM_b20965	0.37	+2.8
1,193,513	-		SM_b20965	0.37	+0.9
1,193,513	-		SM_b20965	0.37	+1.1
1,193,513	-		SM_b20965	0.37	-0.1
1,193,653	+		SM_b20965	0.51	-0.2
1,193,653	+		SM_b20965	0.51	+1.0
1,193,653	+		SM_b20965	0.51	+0.2
1,193,721	-		SM_b20965	0.58	+0.0
1,194,129	-				-0.9
1,194,129	-				+1.4
1,194,137	+				-0.9
1,194,137	+				+3.1
1,194,137	+				-0.4
1,194,137	+				-0.3
1,194,137	+				-0.4
1,194,137	+				+3.7
1,194,138	-				-0.1
1,194,138	-				+0.5
1,194,138	-				-2.3
1,194,138	-				-0.3
1,194,138	-				+0.3
1,194,138	-				+0.1
1,194,228	-				-0.0
1,194,299	-				+0.0
1,194,299	-				-2.7
1,194,485	-		SM_b20966	0.12	+0.3
1,194,524	+		SM_b20966	0.14	+0.1
1,194,529	+		SM_b20966	0.15	+0.4
1,194,598	+		SM_b20966	0.18	+0.4
1,194,599	-		SM_b20966	0.18	-1.9
1,194,599	-		SM_b20966	0.18	-0.3
1,194,613	+		SM_b20966	0.19	-3.0
1,194,614	-		SM_b20966	0.19	-3.1
1,194,669	-		SM_b20966	0.22	-2.5
1,194,670	+		SM_b20966	0.22	+0.5
1,194,901	+		SM_b20966	0.34	-2.0
1,194,976	+		SM_b20966	0.38	+0.8
1,194,976	+		SM_b20966	0.38	+1.8
1,195,298	-		SM_b20966	0.54	+1.2
1,195,345	+		SM_b20966	0.57	+0.1
1,195,345	+		SM_b20966	0.57	-0.1
1,195,400	-		SM_b20966	0.59	-0.2
1,195,441	+		SM_b20966	0.62	-1.2
1,195,441	+		SM_b20966	0.62	-1.8
1,195,441	+		SM_b20966	0.62	-1.7
1,195,634	+		SM_b20966	0.72	+1.3
1,195,634	+		SM_b20966	0.72	-1.5
1,195,635	-		SM_b20966	0.72	-3.0
1,195,697	-		SM_b20966	0.75	+0.7
1,195,697	-		SM_b20966	0.75	+0.1
1,195,744	+		SM_b20966	0.77	-1.5
1,195,745	-		SM_b20966	0.77	+1.3
1,195,745	-		SM_b20966	0.77	+0.3
1,195,745	-		SM_b20966	0.77	+0.9
1,195,750	+		SM_b20966	0.77	-1.5
1,195,751	-		SM_b20966	0.78	-2.9
1,195,771	+				+1.1
1,195,772	-		SM_b20966	0.79	-1.5
1,195,801	+		SM_b20966	0.80	+0.5
1,195,801	+		SM_b20966	0.80	-0.4
1,195,801	+		SM_b20966	0.80	+1.0
1,195,801	+		SM_b20966	0.80	+0.1
1,195,801	+		SM_b20966	0.80	+1.0
1,195,802	-		SM_b20966	0.80	+1.8
1,195,802	-		SM_b20966	0.80	+1.3
1,195,802	-		SM_b20966	0.80	+0.1
1,195,802	-		SM_b20966	0.80	-1.2
1,195,882	+		SM_b20966	0.84	-2.3
1,195,883	-		SM_b20966	0.84	-0.6
1,196,073	+				-0.4
1,196,074	-				+1.1
1,196,179	+				-0.4
1,196,179	+				+1.6
1,196,179	+				+0.5
1,196,180	-				-3.2
1,196,180	-				-1.2
1,196,261	+				+1.1
1,196,261	+				+0.2
1,196,262	-				-1.5
1,196,340	-				-3.5
1,196,340	-				-0.5
1,196,340	-				-0.8
1,196,340	-				-0.0
1,196,341	+				+1.2
1,196,518	+		SM_b20967	0.14	-0.3
1,196,521	+		SM_b20967	0.14	-0.9
1,196,522	-		SM_b20967	0.14	-0.6
1,196,522	-		SM_b20967	0.14	+1.1
1,196,545	+		SM_b20967	0.16	-0.9
1,196,660	+		SM_b20967	0.27	-0.2
1,196,660	+		SM_b20967	0.27	+1.2
1,196,660	+		SM_b20967	0.27	-0.0
1,196,661	-		SM_b20967	0.28	+1.9
1,196,661	-		SM_b20967	0.28	-1.2
1,196,661	-		SM_b20967	0.28	+0.6
1,196,662	+		SM_b20967	0.28	+1.3
1,196,663	-		SM_b20967	0.28	+0.5
1,196,759	-		SM_b20967	0.37	-1.1
1,196,816	-		SM_b20967	0.43	-0.7
1,196,921	-		SM_b20967	0.53	-2.7
1,196,921	-		SM_b20967	0.53	-3.8
1,196,921	-		SM_b20967	0.53	+0.0
1,196,921	-		SM_b20967	0.53	-0.4
1,196,953	+		SM_b20967	0.56	+1.2
1,196,954	-		SM_b20967	0.56	+0.2
1,197,143	+		SM_b20967	0.74	+1.1
1,197,143	+		SM_b20967	0.74	-3.0
1,197,144	-		SM_b20967	0.74	-0.4