Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20745 and SM_b20746 are separated by 563 nucleotides SM_b20746 and SM_b20747 are separated by 19 nucleotides SM_b20747 and SM_b20748 are separated by 151 nucleotides
SM_b20745: SM_b20745 - glutatmine synthetase II protein, at 1,533,876 to 1,534,910
_b20745
SM_b20746: SM_b20746 - hypothetical protein, at 1,535,474 to 1,535,659
_b20746
SM_b20747: SM_b20747 - hypothetical protein, at 1,535,679 to 1,536,353
_b20747
SM_b20748: SM_b20748 - glycosyltransferase, at 1,536,505 to 1,537,569
_b20748
Position (kb)
1535
1536 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1534.504 kb on + strand, within SM_b20745 at 1534.504 kb on + strand, within SM_b20745 at 1534.504 kb on + strand, within SM_b20745 at 1534.577 kb on - strand, within SM_b20745 at 1534.577 kb on - strand, within SM_b20745 at 1534.888 kb on + strand at 1534.888 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.900 kb on + strand at 1534.901 kb on - strand at 1534.925 kb on - strand at 1535.054 kb on + strand at 1535.054 kb on + strand at 1535.346 kb on + strand at 1535.347 kb on - strand at 1535.347 kb on - strand at 1535.347 kb on - strand at 1535.440 kb on + strand at 1535.441 kb on - strand at 1535.441 kb on - strand at 1535.441 kb on - strand at 1535.622 kb on - strand, within SM_b20746 at 1535.670 kb on + strand at 1535.840 kb on + strand, within SM_b20747 at 1535.840 kb on + strand, within SM_b20747 at 1535.841 kb on - strand, within SM_b20747 at 1535.926 kb on + strand, within SM_b20747 at 1535.926 kb on + strand, within SM_b20747 at 1535.927 kb on - strand, within SM_b20747 at 1535.927 kb on - strand, within SM_b20747 at 1535.958 kb on + strand, within SM_b20747 at 1536.032 kb on - strand, within SM_b20747 at 1536.032 kb on - strand, within SM_b20747 at 1536.032 kb on - strand, within SM_b20747 at 1536.060 kb on + strand, within SM_b20747 at 1536.061 kb on - strand, within SM_b20747 at 1536.061 kb on - strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.090 kb on + strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.091 kb on - strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.092 kb on + strand, within SM_b20747 at 1536.093 kb on - strand, within SM_b20747 at 1536.093 kb on - strand, within SM_b20747 at 1536.093 kb on - strand, within SM_b20747 at 1536.113 kb on - strand, within SM_b20747 at 1536.460 kb on + strand at 1536.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 1,534,504 + SM_b20745 0.61 -0.6 1,534,504 + SM_b20745 0.61 +0.6 1,534,504 + SM_b20745 0.61 -1.2 1,534,577 - SM_b20745 0.68 -0.8 1,534,577 - SM_b20745 0.68 -1.0 1,534,888 + +1.1 1,534,888 + -4.3 1,534,900 + +0.6 1,534,900 + -0.1 1,534,900 + +0.2 1,534,900 + +1.7 1,534,900 + -1.9 1,534,901 - -0.6 1,534,925 - -0.9 1,535,054 + +3.0 1,535,054 + -1.1 1,535,346 + -2.0 1,535,347 - -1.1 1,535,347 - -0.2 1,535,347 - -2.1 1,535,440 + -0.3 1,535,441 - -1.5 1,535,441 - +0.5 1,535,441 - +0.7 1,535,622 - SM_b20746 0.80 +0.8 1,535,670 + +0.1 1,535,840 + SM_b20747 0.24 -0.7 1,535,840 + SM_b20747 0.24 -2.5 1,535,841 - SM_b20747 0.24 +0.7 1,535,926 + SM_b20747 0.37 +0.4 1,535,926 + SM_b20747 0.37 +0.5 1,535,927 - SM_b20747 0.37 -0.8 1,535,927 - SM_b20747 0.37 +0.7 1,535,958 + SM_b20747 0.41 +0.5 1,536,032 - SM_b20747 0.52 +1.2 1,536,032 - SM_b20747 0.52 -3.0 1,536,032 - SM_b20747 0.52 +0.3 1,536,060 + SM_b20747 0.56 +0.4 1,536,061 - SM_b20747 0.57 +1.0 1,536,061 - SM_b20747 0.57 -0.5 1,536,090 + SM_b20747 0.61 -0.1 1,536,090 + SM_b20747 0.61 +0.4 1,536,090 + SM_b20747 0.61 -2.8 1,536,090 + SM_b20747 0.61 +1.7 1,536,090 + SM_b20747 0.61 -0.8 1,536,090 + SM_b20747 0.61 -4.0 1,536,090 + SM_b20747 0.61 -0.4 1,536,091 - SM_b20747 0.61 -0.8 1,536,091 - SM_b20747 0.61 +1.1 1,536,091 - SM_b20747 0.61 -1.8 1,536,091 - SM_b20747 0.61 -3.4 1,536,091 - SM_b20747 0.61 +0.7 1,536,091 - SM_b20747 0.61 +0.6 1,536,092 + SM_b20747 0.61 -0.4 1,536,092 + SM_b20747 0.61 +1.8 1,536,092 + SM_b20747 0.61 -0.2 1,536,092 + SM_b20747 0.61 +0.6 1,536,092 + SM_b20747 0.61 -1.8 1,536,092 + SM_b20747 0.61 -0.8 1,536,092 + SM_b20747 0.61 -0.3 1,536,093 - SM_b20747 0.61 +1.8 1,536,093 - SM_b20747 0.61 -0.1 1,536,093 - SM_b20747 0.61 +0.2 1,536,113 - SM_b20747 0.64 +1.2 1,536,460 + +2.4 1,536,461 - -2.1
Or see this region's nucleotide sequence