Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20517 and SM_b20518 are separated by 181 nucleotides SM_b20518 and SM_b20519 are separated by 432 nucleotides
SM_b20517: SM_b20517 - hypothetical protein, at 542,357 to 542,647
_b20517
SM_b20518: SM_b20518 - hypothetical protein, at 542,829 to 543,548
_b20518
SM_b20519: SM_b20519 - hypothetical protein, at 543,981 to 544,349
_b20519
Position (kb) 542
543
544 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 541.972 kb on - strand at 542.140 kb on + strand at 542.141 kb on - strand at 542.215 kb on - strand at 542.215 kb on - strand at 542.308 kb on + strand at 542.309 kb on - strand at 542.321 kb on + strand at 542.322 kb on - strand at 542.358 kb on + strand at 542.369 kb on + strand at 542.369 kb on + strand at 542.369 kb on + strand at 542.760 kb on - strand at 542.801 kb on - strand at 542.922 kb on + strand, within SM_b20518 at 542.922 kb on + strand, within SM_b20518 at 542.968 kb on - strand, within SM_b20518 at 543.049 kb on - strand, within SM_b20518 at 543.100 kb on - strand, within SM_b20518 at 543.100 kb on - strand, within SM_b20518 at 543.103 kb on + strand, within SM_b20518 at 543.103 kb on + strand, within SM_b20518 at 543.103 kb on + strand, within SM_b20518 at 543.103 kb on + strand, within SM_b20518 at 543.103 kb on + strand, within SM_b20518 at 543.103 kb on + strand, within SM_b20518 at 543.104 kb on - strand, within SM_b20518 at 543.104 kb on - strand, within SM_b20518 at 543.104 kb on - strand, within SM_b20518 at 543.105 kb on + strand, within SM_b20518 at 543.147 kb on + strand, within SM_b20518 at 543.147 kb on + strand, within SM_b20518 at 543.148 kb on - strand at 543.148 kb on - strand, within SM_b20518 at 543.148 kb on - strand, within SM_b20518 at 543.148 kb on - strand, within SM_b20518 at 543.458 kb on - strand, within SM_b20518 at 543.486 kb on - strand at 543.486 kb on - strand at 543.486 kb on - strand at 544.178 kb on - strand, within SM_b20519 at 544.267 kb on + strand, within SM_b20519 at 544.330 kb on + strand at 544.371 kb on + strand at 544.379 kb on + strand at 544.380 kb on - strand at 544.408 kb on + strand at 544.409 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 541,972 - +0.6 542,140 + -2.1 542,141 - -1.5 542,215 - -0.1 542,215 - -0.1 542,308 + +0.2 542,309 - -0.3 542,321 + -0.9 542,322 - -0.5 542,358 + -1.3 542,369 + -2.1 542,369 + -1.4 542,369 + -0.1 542,760 - -3.1 542,801 - +1.3 542,922 + SM_b20518 0.13 -2.9 542,922 + SM_b20518 0.13 -1.7 542,968 - SM_b20518 0.19 +1.0 543,049 - SM_b20518 0.31 -2.9 543,100 - SM_b20518 0.38 +0.2 543,100 - SM_b20518 0.38 -2.2 543,103 + SM_b20518 0.38 -2.8 543,103 + SM_b20518 0.38 -0.3 543,103 + SM_b20518 0.38 -3.3 543,103 + SM_b20518 0.38 -0.6 543,103 + SM_b20518 0.38 +0.9 543,103 + SM_b20518 0.38 +1.1 543,104 - SM_b20518 0.38 -2.1 543,104 - SM_b20518 0.38 -0.9 543,104 - SM_b20518 0.38 -0.1 543,105 + SM_b20518 0.38 -0.6 543,147 + SM_b20518 0.44 -1.3 543,147 + SM_b20518 0.44 +0.7 543,148 - +1.1 543,148 - SM_b20518 0.44 +1.0 543,148 - SM_b20518 0.44 -0.4 543,148 - SM_b20518 0.44 +0.9 543,458 - SM_b20518 0.87 +0.3 543,486 - -1.8 543,486 - -0.3 543,486 - +0.2 544,178 - SM_b20519 0.53 -0.1 544,267 + SM_b20519 0.78 +2.0 544,330 + +1.3 544,371 + +2.6 544,379 + +1.1 544,380 - +2.4 544,408 + -1.4 544,409 - -0.4
Or see this region's nucleotide sequence