Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20470 and SM_b20471 are separated by 30 nucleotides SM_b20471 and SM_b20472 are separated by 13 nucleotides
SM_b20470: SM_b20470 - hypothetical protein, at 483,955 to 484,386
_b20470
SM_b20471: SM_b20471 - hypothetical protein, at 484,417 to 484,566
_b20471
SM_b20472: SM_b20472 - nodulation protein, at 484,580 to 486,412
_b20472
Position (kb) 484
485 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 483.453 kb on + strand at 483.454 kb on - strand at 483.468 kb on + strand at 483.479 kb on + strand at 483.479 kb on + strand at 483.480 kb on - strand at 483.509 kb on + strand at 483.546 kb on + strand at 483.546 kb on + strand at 483.626 kb on + strand at 483.709 kb on + strand at 483.823 kb on - strand at 483.823 kb on - strand at 483.852 kb on + strand at 484.023 kb on + strand, within SM_b20470 at 484.024 kb on - strand, within SM_b20470 at 484.047 kb on + strand, within SM_b20470 at 484.083 kb on - strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.237 kb on + strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.257 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.328 kb on - strand, within SM_b20470 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.447 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.585 kb on + strand at 484.585 kb on + strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.590 kb on + strand at 484.595 kb on - strand at 484.608 kb on - strand at 484.721 kb on + strand at 484.722 kb on - strand at 484.722 kb on - strand at 484.776 kb on - strand, within SM_b20472 at 484.776 kb on - strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.914 kb on - strand, within SM_b20472 at 484.917 kb on + strand, within SM_b20472 at 484.918 kb on - strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.104 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.157 kb on - strand, within SM_b20472 at 485.159 kb on + strand, within SM_b20472 at 485.160 kb on - strand, within SM_b20472 at 485.189 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.192 kb on - strand, within SM_b20472 at 485.214 kb on - strand, within SM_b20472
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 483,453 + +0.3 483,454 - -1.7 483,468 + +0.1 483,479 + -1.4 483,479 + -4.6 483,480 - -2.1 483,509 + +1.7 483,546 + +0.7 483,546 + -0.9 483,626 + +1.1 483,709 + +0.7 483,823 - -0.1 483,823 - +1.1 483,852 + -1.2 484,023 + SM_b20470 0.16 -0.2 484,024 - SM_b20470 0.16 -1.9 484,047 + SM_b20470 0.21 -0.3 484,083 - SM_b20470 0.30 -2.6 484,193 + SM_b20470 0.55 +1.0 484,193 + SM_b20470 0.55 -0.6 484,194 - SM_b20470 0.55 -2.8 484,194 - SM_b20470 0.55 -0.0 484,194 - SM_b20470 0.55 -1.3 484,198 - SM_b20470 0.56 -1.9 484,198 - SM_b20470 0.56 -1.6 484,198 - SM_b20470 0.56 -0.9 484,198 - SM_b20470 0.56 -0.3 484,198 - SM_b20470 0.56 +0.5 484,237 + SM_b20470 0.65 -1.1 484,238 - SM_b20470 0.66 +0.7 484,238 - SM_b20470 0.66 -1.7 484,257 + SM_b20470 0.70 +1.2 484,327 + SM_b20470 0.86 -0.9 484,327 + SM_b20470 0.86 -1.0 484,327 + SM_b20470 0.86 -0.1 484,328 - SM_b20470 0.86 -2.7 484,444 + SM_b20471 0.18 +0.3 484,444 + SM_b20471 0.18 +1.0 484,444 + -1.5 484,444 + SM_b20471 0.18 +1.0 484,444 + SM_b20471 0.18 -3.3 484,445 - SM_b20471 0.19 -1.2 484,445 - SM_b20471 0.19 +1.0 484,445 - SM_b20471 0.19 +3.0 484,445 - SM_b20471 0.19 +1.8 484,445 - SM_b20471 0.19 -0.9 484,447 - +0.1 484,553 - +1.8 484,553 - +0.1 484,553 - -0.4 484,585 + -3.3 484,585 + -1.2 484,586 - -2.3 484,586 - -0.0 484,586 - -1.2 484,586 - -0.9 484,586 - -0.9 484,590 + +0.4 484,595 - +0.7 484,608 - -2.2 484,721 + -0.1 484,722 - +3.5 484,722 - -1.7 484,776 - SM_b20472 0.11 -1.5 484,776 - SM_b20472 0.11 +0.2 484,817 + SM_b20472 0.13 -3.2 484,817 + SM_b20472 0.13 +0.7 484,818 - SM_b20472 0.13 -2.5 484,818 - SM_b20472 0.13 -2.6 484,914 - SM_b20472 0.18 +0.7 484,917 + SM_b20472 0.18 -0.5 484,918 - SM_b20472 0.18 +0.9 485,100 + SM_b20472 0.28 -0.5 485,100 + SM_b20472 0.28 -0.7 485,101 - SM_b20472 0.28 -2.0 485,101 - SM_b20472 0.28 -1.7 485,104 + SM_b20472 0.29 -0.0 485,156 + SM_b20472 0.31 +1.4 485,156 + SM_b20472 0.31 -1.9 485,157 - SM_b20472 0.31 +0.4 485,159 + SM_b20472 0.32 -3.0 485,160 - SM_b20472 0.32 +1.1 485,189 + SM_b20472 0.33 -0.7 485,191 + SM_b20472 0.33 +1.6 485,191 + SM_b20472 0.33 -2.6 485,192 - SM_b20472 0.33 -2.8 485,214 - SM_b20472 0.35 -3.5
Or see this region's nucleotide sequence