Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20359 and SM_b20360 are separated by 40 nucleotides SM_b20360 and SM_b20361 are separated by 85 nucleotides SM_b20361 and SM_b20362 are separated by 90 nucleotides
SM_b20359: SM_b20359 - hypothetical protein, at 369,491 to 370,786
_b20359
SM_b20360: SM_b20360 - hypothetical protein, at 370,827 to 371,558
_b20360
SM_b20361: SM_b20361 - ionic voltage-gated channel protein, at 371,644 to 372,441
_b20361
SM_b20362: SM_b20362 - inositol monophosphatase, at 372,532 to 373,332
_b20362
Position (kb) 370
371
372 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 369.872 kb on + strand, within SM_b20359 at 369.872 kb on + strand, within SM_b20359 at 369.873 kb on - strand, within SM_b20359 at 369.873 kb on - strand, within SM_b20359 at 370.023 kb on + strand, within SM_b20359 at 370.024 kb on - strand, within SM_b20359 at 370.078 kb on - strand, within SM_b20359 at 370.214 kb on - strand, within SM_b20359 at 370.694 kb on - strand at 370.694 kb on - strand at 370.695 kb on + strand at 370.696 kb on - strand at 370.696 kb on - strand at 370.696 kb on - strand at 371.063 kb on - strand, within SM_b20360 at 371.136 kb on + strand, within SM_b20360 at 371.136 kb on + strand, within SM_b20360 at 371.137 kb on - strand, within SM_b20360 at 371.481 kb on + strand, within SM_b20360 at 371.482 kb on - strand, within SM_b20360 at 371.485 kb on - strand at 371.538 kb on - strand at 371.556 kb on + strand at 371.590 kb on + strand at 371.590 kb on + strand at 371.590 kb on + strand at 371.591 kb on - strand at 371.663 kb on - strand at 371.753 kb on + strand, within SM_b20361 at 371.753 kb on + strand, within SM_b20361 at 371.753 kb on + strand, within SM_b20361 at 371.794 kb on + strand, within SM_b20361 at 371.895 kb on - strand, within SM_b20361 at 371.895 kb on - strand, within SM_b20361 at 371.934 kb on - strand, within SM_b20361 at 371.948 kb on + strand, within SM_b20361 at 372.245 kb on + strand, within SM_b20361 at 372.261 kb on - strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.435 kb on + strand at 372.436 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 369,872 + SM_b20359 0.29 -0.8 369,872 + SM_b20359 0.29 -0.4 369,873 - SM_b20359 0.29 +0.9 369,873 - SM_b20359 0.29 +0.3 370,023 + SM_b20359 0.41 -1.4 370,024 - SM_b20359 0.41 -0.9 370,078 - SM_b20359 0.45 -0.2 370,214 - SM_b20359 0.56 +3.5 370,694 - -1.2 370,694 - -3.4 370,695 + -0.2 370,696 - -2.2 370,696 - -0.6 370,696 - +0.6 371,063 - SM_b20360 0.32 -0.1 371,136 + SM_b20360 0.42 -1.1 371,136 + SM_b20360 0.42 -0.5 371,137 - SM_b20360 0.42 -1.4 371,481 + SM_b20360 0.89 -2.0 371,482 - SM_b20360 0.89 +0.2 371,485 - -2.5 371,538 - +0.2 371,556 + -1.2 371,590 + +0.1 371,590 + -0.0 371,590 + +1.2 371,591 - -1.2 371,663 - +2.6 371,753 + SM_b20361 0.14 +0.7 371,753 + SM_b20361 0.14 -0.5 371,753 + SM_b20361 0.14 +2.0 371,794 + SM_b20361 0.19 -0.3 371,895 - SM_b20361 0.31 -2.5 371,895 - SM_b20361 0.31 +0.4 371,934 - SM_b20361 0.36 -1.8 371,948 + SM_b20361 0.38 -0.3 372,245 + SM_b20361 0.75 +0.7 372,261 - SM_b20361 0.77 +0.8 372,319 + SM_b20361 0.85 -0.0 372,319 + SM_b20361 0.85 -0.4 372,319 + SM_b20361 0.85 -3.4 372,435 + +0.7 372,436 - +0.7
Or see this region's nucleotide sequence