Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20289 and SM_b20290 are separated by 151 nucleotides SM_b20290 and SM_b20291 are separated by 7 nucleotides
SM_b20289: SM_b20289 - permease, at 294,233 to 295,582
_b20289
SM_b20290: SM_b20290 - transcriptional regulator, at 295,734 to 296,729
_b20290
SM_b20291: SM_b20291 - hypothetical protein, at 296,737 to 299,220
_b20291
Position (kb) 295
296
297 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 294.937 kb on + strand, within SM_b20289 at 294.937 kb on + strand, within SM_b20289 at 294.937 kb on + strand, within SM_b20289 at 294.937 kb on + strand, within SM_b20289 at 294.937 kb on + strand, within SM_b20289 at 294.937 kb on + strand, within SM_b20289 at 294.938 kb on - strand, within SM_b20289 at 294.938 kb on - strand, within SM_b20289 at 294.939 kb on + strand, within SM_b20289 at 294.939 kb on + strand, within SM_b20289 at 294.939 kb on + strand, within SM_b20289 at 295.122 kb on + strand, within SM_b20289 at 295.122 kb on + strand, within SM_b20289 at 295.123 kb on - strand, within SM_b20289 at 295.139 kb on + strand, within SM_b20289 at 295.140 kb on - strand, within SM_b20289 at 295.185 kb on + strand, within SM_b20289 at 295.205 kb on + strand, within SM_b20289 at 295.224 kb on + strand, within SM_b20289 at 295.224 kb on + strand, within SM_b20289 at 295.224 kb on + strand, within SM_b20289 at 295.225 kb on - strand, within SM_b20289 at 295.225 kb on - strand, within SM_b20289 at 295.559 kb on - strand at 295.647 kb on - strand at 295.647 kb on - strand at 295.818 kb on + strand at 295.818 kb on + strand at 295.819 kb on - strand at 296.158 kb on + strand, within SM_b20290 at 296.310 kb on + strand, within SM_b20290 at 296.310 kb on + strand, within SM_b20290 at 296.359 kb on - strand, within SM_b20290 at 296.801 kb on - strand at 296.924 kb on + strand at 296.924 kb on + strand at 296.925 kb on - strand at 296.925 kb on - strand at 296.925 kb on - strand at 297.155 kb on + strand, within SM_b20291 at 297.156 kb on - strand, within SM_b20291 at 297.321 kb on + strand, within SM_b20291 at 297.321 kb on + strand, within SM_b20291 at 297.322 kb on - strand, within SM_b20291 at 297.337 kb on + strand, within SM_b20291 at 297.338 kb on - strand, within SM_b20291 at 297.404 kb on + strand, within SM_b20291 at 297.545 kb on - strand, within SM_b20291 at 297.611 kb on + strand, within SM_b20291 at 297.612 kb on - strand, within SM_b20291
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 294,937 + SM_b20289 0.52 +0.4 294,937 + SM_b20289 0.52 -0.8 294,937 + SM_b20289 0.52 +0.2 294,937 + SM_b20289 0.52 +1.6 294,937 + SM_b20289 0.52 -1.3 294,937 + SM_b20289 0.52 +0.6 294,938 - SM_b20289 0.52 -2.8 294,938 - SM_b20289 0.52 +0.4 294,939 + SM_b20289 0.52 -1.0 294,939 + SM_b20289 0.52 -0.1 294,939 + SM_b20289 0.52 -0.2 295,122 + SM_b20289 0.66 +0.4 295,122 + SM_b20289 0.66 -2.7 295,123 - SM_b20289 0.66 -0.2 295,139 + SM_b20289 0.67 -0.2 295,140 - SM_b20289 0.67 -0.2 295,185 + SM_b20289 0.71 -0.3 295,205 + SM_b20289 0.72 -1.1 295,224 + SM_b20289 0.73 +0.3 295,224 + SM_b20289 0.73 -0.7 295,224 + SM_b20289 0.73 +0.9 295,225 - SM_b20289 0.73 -3.9 295,225 - SM_b20289 0.73 -1.2 295,559 - -1.8 295,647 - +2.2 295,647 - -0.3 295,818 + +1.8 295,818 + -0.4 295,819 - +1.1 296,158 + SM_b20290 0.43 -0.8 296,310 + SM_b20290 0.58 -3.1 296,310 + SM_b20290 0.58 +0.3 296,359 - SM_b20290 0.63 -2.2 296,801 - +0.3 296,924 + +0.8 296,924 + +0.8 296,925 - -3.2 296,925 - -1.4 296,925 - -2.2 297,155 + SM_b20291 0.17 -0.3 297,156 - SM_b20291 0.17 -0.3 297,321 + SM_b20291 0.24 -0.8 297,321 + SM_b20291 0.24 +0.4 297,322 - SM_b20291 0.24 -3.8 297,337 + SM_b20291 0.24 +0.4 297,338 - SM_b20291 0.24 +1.2 297,404 + SM_b20291 0.27 -0.5 297,545 - SM_b20291 0.33 +0.1 297,611 + SM_b20291 0.35 +1.2 297,612 - SM_b20291 0.35 -2.0
Or see this region's nucleotide sequence