Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20253 and SM_b20254 are separated by 208 nucleotides SM_b20254 and SM_b20255 are separated by 74 nucleotides SM_b20255 and SM_b20256 are separated by 131 nucleotides
SM_b20253: SM_b20253 - hypothetical protein, at 259,295 to 260,200
_b20253
SM_b20254: SM_b20254 - hypothetical protein, at 260,409 to 260,684
_b20254
SM_b20255: SM_b20255 - hypothetical protein, at 260,759 to 261,310
_b20255
SM_b20256: SM_b20256 - hypothetical protein, at 261,442 to 261,891
_b20256
Position (kb) 260
261 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 259.479 kb on + strand, within SM_b20253 at 259.640 kb on + strand, within SM_b20253 at 259.640 kb on + strand, within SM_b20253 at 259.640 kb on + strand, within SM_b20253 at 259.640 kb on + strand, within SM_b20253 at 259.640 kb on + strand, within SM_b20253 at 259.640 kb on + strand, within SM_b20253 at 259.640 kb on + strand, within SM_b20253 at 259.641 kb on - strand, within SM_b20253 at 259.641 kb on - strand, within SM_b20253 at 259.641 kb on - strand, within SM_b20253 at 259.719 kb on + strand, within SM_b20253 at 259.719 kb on + strand, within SM_b20253 at 259.727 kb on + strand, within SM_b20253 at 259.727 kb on + strand, within SM_b20253 at 259.729 kb on + strand, within SM_b20253 at 259.730 kb on - strand, within SM_b20253 at 259.730 kb on - strand, within SM_b20253 at 259.730 kb on - strand, within SM_b20253 at 259.732 kb on - strand, within SM_b20253 at 259.751 kb on - strand, within SM_b20253 at 259.899 kb on + strand, within SM_b20253 at 259.900 kb on - strand, within SM_b20253 at 259.900 kb on - strand, within SM_b20253 at 259.948 kb on - strand, within SM_b20253 at 260.053 kb on + strand, within SM_b20253 at 260.152 kb on - strand at 260.200 kb on + strand at 260.316 kb on + strand at 260.317 kb on - strand at 260.367 kb on + strand at 260.368 kb on - strand at 260.760 kb on + strand at 260.760 kb on + strand at 260.760 kb on + strand at 260.879 kb on + strand, within SM_b20255 at 260.879 kb on + strand, within SM_b20255 at 260.879 kb on + strand, within SM_b20255 at 261.071 kb on + strand, within SM_b20255 at 261.071 kb on + strand, within SM_b20255 at 261.355 kb on + strand at 261.674 kb on + strand, within SM_b20256 at 261.674 kb on + strand, within SM_b20256
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 259,479 + SM_b20253 0.20 +0.2 259,640 + SM_b20253 0.38 +0.5 259,640 + SM_b20253 0.38 +0.6 259,640 + SM_b20253 0.38 -0.5 259,640 + SM_b20253 0.38 +0.4 259,640 + SM_b20253 0.38 -1.5 259,640 + SM_b20253 0.38 +1.2 259,640 + SM_b20253 0.38 -1.0 259,641 - SM_b20253 0.38 -2.5 259,641 - SM_b20253 0.38 -2.0 259,641 - SM_b20253 0.38 +0.4 259,719 + SM_b20253 0.47 +1.4 259,719 + SM_b20253 0.47 -4.7 259,727 + SM_b20253 0.48 -0.5 259,727 + SM_b20253 0.48 +0.6 259,729 + SM_b20253 0.48 +0.9 259,730 - SM_b20253 0.48 +0.2 259,730 - SM_b20253 0.48 +0.7 259,730 - SM_b20253 0.48 +0.2 259,732 - SM_b20253 0.48 +0.6 259,751 - SM_b20253 0.50 -0.4 259,899 + SM_b20253 0.67 -1.2 259,900 - SM_b20253 0.67 -2.4 259,900 - SM_b20253 0.67 -0.4 259,948 - SM_b20253 0.72 -0.0 260,053 + SM_b20253 0.84 -2.1 260,152 - +1.5 260,200 + +0.9 260,316 + +0.8 260,317 - +1.1 260,367 + +2.7 260,368 - -0.3 260,760 + +0.3 260,760 + -3.1 260,760 + +1.0 260,879 + SM_b20255 0.22 +1.0 260,879 + SM_b20255 0.22 -0.1 260,879 + SM_b20255 0.22 +0.8 261,071 + SM_b20255 0.57 +2.5 261,071 + SM_b20255 0.57 +0.6 261,355 + -0.9 261,674 + SM_b20256 0.52 +1.2 261,674 + SM_b20256 0.52 -0.7
Or see this region's nucleotide sequence