Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20077
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
84,215 | + | SM_b20076 | 0.25 | -4.8 | |
84,517 | + | SM_b20076 | 0.54 | -0.1 | |
84,562 | + | SM_b20076 | 0.59 | -0.8 | |
84,563 | - | SM_b20076 | 0.59 | +0.9 | |
84,598 | + | SM_b20076 | 0.62 | -2.1 | |
84,598 | + | SM_b20076 | 0.62 | +0.6 | |
84,599 | - | SM_b20076 | 0.62 | +0.4 | |
85,032 | + | -0.0 | |||
85,033 | - | -1.0 | |||
85,033 | - | +0.3 | |||
85,035 | + | +0.7 | |||
85,035 | + | -3.9 | |||
85,035 | + | -2.7 | |||
85,036 | - | -1.2 | |||
85,036 | - | +1.0 | |||
85,036 | - | +1.3 | |||
85,384 | - | SM_b20077 | 0.18 | -0.8 | |
85,384 | - | SM_b20077 | 0.18 | +1.3 | |
85,606 | + | SM_b20077 | 0.32 | +0.0 | |
85,606 | + | SM_b20077 | 0.32 | +0.1 | |
85,607 | - | SM_b20077 | 0.32 | +0.9 | |
85,607 | - | SM_b20077 | 0.32 | +0.7 | |
85,607 | - | SM_b20077 | 0.32 | +0.9 | |
85,826 | - | SM_b20077 | 0.45 | +0.9 | |
86,136 | + | SM_b20077 | 0.63 | -0.6 | |
86,445 | + | SM_b20077 | 0.82 | -4.6 | |
86,445 | + | SM_b20077 | 0.82 | +0.6 | |
86,446 | - | SM_b20077 | 0.82 | -0.3 | |
86,446 | - | SM_b20077 | 0.82 | +0.5 | |
86,446 | - | SM_b20077 | 0.82 | +0.2 | |
86,446 | - | SM_b20077 | 0.82 | -0.3 | |
86,446 | - | SM_b20077 | 0.82 | -0.0 | |
86,477 | - | SM_b20077 | 0.84 | +2.7 | |
86,484 | - | SM_b20077 | 0.84 | -1.6 | |
86,540 | + | SM_b20077 | 0.88 | -0.3 | |
86,872 | + | SM_b20078 | 0.20 | -1.0 | |
86,872 | + | SM_b20078 | 0.20 | -0.7 | |
87,060 | + | SM_b20078 | 0.50 | +0.4 | |
87,060 | + | SM_b20078 | 0.50 | +0.4 | |
87,060 | + | SM_b20078 | 0.50 | -0.1 | |
87,061 | - | SM_b20078 | 0.50 | -2.9 | |
87,188 | + | SM_b20078 | 0.70 | -1.1 | |
87,275 | + | SM_b20078 | 0.83 | -0.9 | |
87,276 | - | SM_b20078 | 0.83 | -1.7 | |
87,357 | + | +0.0 | |||
87,437 | + | +1.1 | |||
87,542 | - | +0.5 | |||
87,542 | - | -1.3 | |||
87,553 | + | -0.4 | |||
87,612 | + | +1.6 | |||
87,618 | + | -0.1 | |||
87,618 | + | +1.7 | |||
87,618 | + | -0.5 | |||
87,619 | - | -1.9 | |||
87,619 | - | -1.9 | |||
87,625 | - | -0.3 | |||
87,625 | - | -3.6 | |||
87,625 | - | -0.3 | |||
87,642 | + | -0.3 |
Or see this region's nucleotide sequence