Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20073 and SM_b20074 are separated by 195 nucleotides SM_b20074 and SM_b20075 are separated by 48 nucleotides SM_b20075 and SM_b20076 are separated by 98 nucleotides
SM_b20073: SM_b20073 - oxidoreductase, at 82,331 to 83,188
_b20073
SM_b20074: SM_b20074 - hypothetical protein, at 83,384 to 83,626
_b20074
SM_b20075: SM_b20075 - hypothetical protein, at 83,675 to 83,866
_b20075
SM_b20076: SM_b20076 - short-chain dehydrogenase, at 83,965 to 84,981
_b20076
Position (kb) 83
84 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 82.450 kb on + strand, within SM_b20073 at 82.450 kb on + strand, within SM_b20073 at 82.451 kb on - strand, within SM_b20073 at 82.547 kb on + strand, within SM_b20073 at 82.548 kb on - strand, within SM_b20073 at 82.617 kb on + strand, within SM_b20073 at 82.618 kb on - strand, within SM_b20073 at 82.716 kb on + strand, within SM_b20073 at 82.716 kb on + strand, within SM_b20073 at 82.971 kb on + strand, within SM_b20073 at 82.971 kb on + strand, within SM_b20073 at 82.978 kb on + strand, within SM_b20073 at 82.978 kb on + strand, within SM_b20073 at 83.268 kb on - strand at 83.380 kb on + strand at 83.380 kb on + strand at 83.381 kb on - strand at 83.555 kb on + strand, within SM_b20074 at 83.555 kb on + strand, within SM_b20074 at 83.555 kb on + strand, within SM_b20074 at 83.555 kb on + strand, within SM_b20074 at 83.556 kb on - strand, within SM_b20074 at 83.556 kb on - strand, within SM_b20074 at 83.556 kb on - strand, within SM_b20074 at 83.759 kb on + strand, within SM_b20075 at 83.760 kb on - strand, within SM_b20075 at 83.927 kb on + strand at 83.927 kb on + strand at 83.928 kb on - strand at 83.928 kb on - strand at 83.964 kb on + strand at 83.965 kb on - strand at 83.965 kb on - strand at 84.215 kb on + strand, within SM_b20076 at 84.517 kb on + strand, within SM_b20076 at 84.562 kb on + strand, within SM_b20076 at 84.563 kb on - strand, within SM_b20076 at 84.598 kb on + strand, within SM_b20076 at 84.598 kb on + strand, within SM_b20076 at 84.599 kb on - strand, within SM_b20076
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 82,450 + SM_b20073 0.14 +0.4 82,450 + SM_b20073 0.14 +1.0 82,451 - SM_b20073 0.14 +0.2 82,547 + SM_b20073 0.25 +2.0 82,548 - SM_b20073 0.25 +0.8 82,617 + SM_b20073 0.33 +1.7 82,618 - SM_b20073 0.33 +1.1 82,716 + SM_b20073 0.45 -1.0 82,716 + SM_b20073 0.45 +0.7 82,971 + SM_b20073 0.75 +1.2 82,971 + SM_b20073 0.75 +1.6 82,978 + SM_b20073 0.75 +2.1 82,978 + SM_b20073 0.75 -0.6 83,268 - +0.2 83,380 + +1.5 83,380 + -0.2 83,381 - -1.1 83,555 + SM_b20074 0.70 +1.0 83,555 + SM_b20074 0.70 +0.4 83,555 + SM_b20074 0.70 +0.5 83,555 + SM_b20074 0.70 +1.3 83,556 - SM_b20074 0.71 +0.6 83,556 - SM_b20074 0.71 -0.3 83,556 - SM_b20074 0.71 +0.1 83,759 + SM_b20075 0.44 +2.4 83,760 - SM_b20075 0.44 -0.4 83,927 + -1.7 83,927 + -0.3 83,928 - -0.3 83,928 - -3.1 83,964 + -0.7 83,965 - -1.0 83,965 - -0.4 84,215 + SM_b20076 0.25 -4.8 84,517 + SM_b20076 0.54 -0.1 84,562 + SM_b20076 0.59 -0.8 84,563 - SM_b20076 0.59 +0.9 84,598 + SM_b20076 0.62 -2.1 84,598 + SM_b20076 0.62 +0.6 84,599 - SM_b20076 0.62 +0.4
Or see this region's nucleotide sequence