Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20023 and SM_b20024 are separated by 16 nucleotides SM_b20024 and SM_b20025 are separated by 249 nucleotides
SM_b20023: SM_b20023 - hypothetical protein, at 31,301 to 34,918
_b20023
SM_b20024: SM_b20024 - ribosomal large subunit pseudouridine synthase B, at 34,935 to 35,897
_b20024
SM_b20025: SM_b20025 - hypothetical protein, at 36,147 to 37,124
_b20025
Position (kb) 34
35
36 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 34.009 kb on - strand, within SM_b20023 at 34.248 kb on + strand, within SM_b20023 at 34.249 kb on - strand, within SM_b20023 at 34.249 kb on - strand, within SM_b20023 at 34.272 kb on + strand, within SM_b20023 at 34.273 kb on - strand, within SM_b20023 at 34.309 kb on - strand, within SM_b20023 at 34.309 kb on - strand, within SM_b20023 at 34.343 kb on + strand, within SM_b20023 at 34.402 kb on - strand, within SM_b20023 at 34.407 kb on + strand, within SM_b20023 at 34.408 kb on - strand, within SM_b20023 at 34.408 kb on - strand, within SM_b20023 at 34.408 kb on - strand, within SM_b20023 at 34.463 kb on + strand, within SM_b20023 at 34.538 kb on + strand, within SM_b20023 at 34.538 kb on + strand, within SM_b20023 at 34.539 kb on - strand, within SM_b20023 at 34.552 kb on - strand, within SM_b20023 at 34.605 kb on + strand at 34.873 kb on + strand at 34.874 kb on - strand at 35.066 kb on + strand, within SM_b20024 at 35.066 kb on + strand, within SM_b20024 at 35.067 kb on - strand, within SM_b20024 at 35.067 kb on - strand, within SM_b20024 at 35.067 kb on - strand, within SM_b20024 at 35.067 kb on - strand, within SM_b20024 at 35.365 kb on - strand, within SM_b20024 at 35.576 kb on - strand, within SM_b20024 at 35.576 kb on - strand, within SM_b20024 at 35.578 kb on - strand, within SM_b20024 at 35.578 kb on - strand, within SM_b20024 at 35.578 kb on - strand, within SM_b20024 at 35.578 kb on - strand, within SM_b20024 at 35.578 kb on - strand, within SM_b20024 at 35.872 kb on - strand at 36.023 kb on + strand at 36.063 kb on - strand at 36.405 kb on + strand, within SM_b20025 at 36.406 kb on - strand, within SM_b20025 at 36.492 kb on + strand, within SM_b20025 at 36.493 kb on - strand, within SM_b20025 at 36.693 kb on + strand, within SM_b20025 at 36.694 kb on - strand, within SM_b20025 at 36.694 kb on - strand, within SM_b20025 at 36.804 kb on + strand, within SM_b20025
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 34,009 - SM_b20023 0.75 +0.9 34,248 + SM_b20023 0.81 -4.0 34,249 - SM_b20023 0.81 +1.2 34,249 - SM_b20023 0.81 +0.1 34,272 + SM_b20023 0.82 +0.5 34,273 - SM_b20023 0.82 +2.0 34,309 - SM_b20023 0.83 -1.4 34,309 - SM_b20023 0.83 -1.8 34,343 + SM_b20023 0.84 +0.4 34,402 - SM_b20023 0.86 +3.1 34,407 + SM_b20023 0.86 -0.2 34,408 - SM_b20023 0.86 -0.4 34,408 - SM_b20023 0.86 +0.2 34,408 - SM_b20023 0.86 -1.5 34,463 + SM_b20023 0.87 -0.6 34,538 + SM_b20023 0.89 +0.9 34,538 + SM_b20023 0.89 +0.4 34,539 - SM_b20023 0.89 -0.7 34,552 - SM_b20023 0.90 +1.1 34,605 + +0.1 34,873 + -0.0 34,874 - +1.5 35,066 + SM_b20024 0.14 -0.6 35,066 + SM_b20024 0.14 -0.3 35,067 - SM_b20024 0.14 -0.3 35,067 - SM_b20024 0.14 +1.4 35,067 - SM_b20024 0.14 +1.0 35,067 - SM_b20024 0.14 -0.1 35,365 - SM_b20024 0.45 +0.3 35,576 - SM_b20024 0.67 +1.0 35,576 - SM_b20024 0.67 +0.6 35,578 - SM_b20024 0.67 +0.6 35,578 - SM_b20024 0.67 +0.4 35,578 - SM_b20024 0.67 +0.5 35,578 - SM_b20024 0.67 -2.7 35,578 - SM_b20024 0.67 -0.4 35,872 - +0.4 36,023 + +0.4 36,063 - -4.2 36,405 + SM_b20025 0.26 -0.2 36,406 - SM_b20025 0.26 +0.4 36,492 + SM_b20025 0.35 +0.3 36,493 - SM_b20025 0.35 -3.2 36,693 + SM_b20025 0.56 +0.9 36,694 - SM_b20025 0.56 -4.0 36,694 - SM_b20025 0.56 -0.5 36,804 + SM_b20025 0.67 -0.5
Or see this region's nucleotide sequence