Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01598

Experiment: PYE with Chlorite 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chlorite 0.5 mM
1,718,667	-				+1.6
1,718,765	-				-0.2
1,718,770	-				-0.5
1,718,809	+				-0.7
1,718,818	-				+0.1
1,718,828	-				+1.9
1,718,845	-				+2.0
1,718,884	+				-1.0
1,718,922	+				-1.1
1,718,924	+				-0.9
1,718,933	-				+0.1
1,718,942	+				+0.6
1,718,969	+				-2.1
1,718,975	-				-0.2
1,718,987	-				-0.1
1,719,015	-		CCNA_01597	0.13	-0.2
1,719,019	+		CCNA_01597	0.15	-1.4
1,719,022	-		CCNA_01597	0.16	-0.9
1,719,027	-		CCNA_01597	0.18	-2.1
1,719,027	-		CCNA_01597	0.18	-0.1
1,719,041	-		CCNA_01597	0.24	-0.8
1,719,100	+		CCNA_01597	0.48	-0.9
1,719,108	-		CCNA_01597	0.51	-0.4
1,719,140	+		CCNA_01597	0.64	+0.1
1,719,142	+		CCNA_01597	0.65	+0.6
1,719,143	+		CCNA_01597	0.65	+2.0
1,719,152	+		CCNA_01597	0.69	-1.7
1,719,152	+		CCNA_01597	0.69	-1.4
1,719,160	-		CCNA_01597	0.72	+0.8
1,719,174	+				+1.6
1,719,174	-		CCNA_01597	0.78	-1.4
1,719,179	+		CCNA_01597	0.80	+0.2
1,719,224	+				+0.4
1,719,232	-				+0.2
1,719,238	+				-1.8
1,719,244	-				-1.0
1,719,259	-				-0.8
1,719,260	+				-0.4
1,719,260	+				-0.9
1,719,322	+				-1.1
1,719,322	+				+0.4
1,719,325	-				-2.7
1,719,331	-				+2.0
1,719,345	-				-1.9
1,719,345	-				-2.6
1,719,345	-				-0.6
1,719,350	-				-1.4
1,719,411	+				-0.4
1,719,432	+				-0.6
1,719,439	-				+1.3
1,719,447	+				-0.1
1,719,453	+				+0.4
1,719,465	+				-0.1
1,719,470	+				-0.3
1,719,518	+		CCNA_01598	0.11	+1.2
1,719,518	+		CCNA_01598	0.11	-0.4
1,719,518	+		CCNA_01598	0.11	+1.4
1,719,518	+		CCNA_01598	0.11	+0.4
1,719,518	+		CCNA_01598	0.11	+0.2
1,719,526	-		CCNA_01598	0.12	-0.6
1,719,526	-		CCNA_01598	0.12	+0.2
1,719,535	+		CCNA_01598	0.12	-0.0
1,719,543	-		CCNA_01598	0.13	-2.4
1,719,543	-		CCNA_01598	0.13	+0.6
1,719,581	-		CCNA_01598	0.15	-0.4
1,719,608	-		CCNA_01598	0.17	-0.5
1,719,610	+		CCNA_01598	0.17	-1.9
1,719,618	-		CCNA_01598	0.18	+0.8
1,719,620	+		CCNA_01598	0.18	-2.3
1,719,625	+		CCNA_01598	0.18	-0.8
1,719,743	-		CCNA_01598	0.26	-0.5
1,719,755	+		CCNA_01598	0.27	-1.1
1,719,755	+		CCNA_01598	0.27	-1.1
1,719,755	+		CCNA_01598	0.27	-1.4
1,719,859	+		CCNA_01598	0.34	-0.5
1,719,958	-		CCNA_01598	0.40	-0.1
1,719,958	-		CCNA_01598	0.40	-0.6
1,720,002	-		CCNA_01598	0.43	-1.3
1,720,002	-		CCNA_01598	0.43	+1.9
1,720,008	-		CCNA_01598	0.44	-1.5
1,720,047	-		CCNA_01598	0.46	-0.6
1,720,101	-		CCNA_01598	0.50	-0.6
1,720,116	+		CCNA_01598	0.51	-0.1
1,720,187	+		CCNA_01598	0.55	-0.8
1,720,244	-		CCNA_01598	0.59	-2.1
1,720,248	+		CCNA_01598	0.60	-0.7
1,720,248	+		CCNA_01598	0.60	-0.9
1,720,248	+		CCNA_01598	0.60	+1.6
1,720,248	+		CCNA_01598	0.60	-0.1
1,720,256	-		CCNA_01598	0.60	+0.3
1,720,256	-		CCNA_01598	0.60	-0.2
1,720,258	+		CCNA_01598	0.60	+2.0
1,720,258	+		CCNA_01598	0.60	+1.5
1,720,275	-		CCNA_01598	0.61	+1.3
1,720,322	+		CCNA_01598	0.64	+0.2
1,720,330	+		CCNA_01598	0.65	-0.4
1,720,330	-		CCNA_01598	0.65	-0.6
1,720,341	+		CCNA_01598	0.66	-1.3
1,720,392	+		CCNA_01598	0.69	-1.0
1,720,404	-		CCNA_01598	0.70	+0.1
1,720,412	-		CCNA_01598	0.70	+0.9
1,720,421	-		CCNA_01598	0.71	-1.5
1,720,424	-				+1.9
1,720,469	-		CCNA_01598	0.74	+1.8
1,720,540	+		CCNA_01598	0.79	-0.1
1,720,562	+		CCNA_01598	0.80	-0.9
1,720,592	+		CCNA_01598	0.82	-0.9
1,720,607	+		CCNA_01598	0.83	-1.6
1,720,607	+		CCNA_01598	0.83	-1.1
1,720,615	-		CCNA_01598	0.84	-0.2
1,720,615	-		CCNA_01598	0.84	-1.8
1,720,626	+		CCNA_01598	0.85	-0.5
1,720,626	+		CCNA_01598	0.85	-0.3
1,720,634	-		CCNA_01598	0.85	-1.9
1,720,634	-		CCNA_01598	0.85	+0.2
1,720,639	-		CCNA_01598	0.85	-2.2
1,720,650	-		CCNA_01598	0.86	+0.2
1,720,660	-		CCNA_01598	0.87	+0.9
1,720,693	+		CCNA_01598	0.89	-1.2
1,720,693	+		CCNA_01598	0.89	+1.1
1,720,693	+		CCNA_01598	0.89	-1.3
1,720,693	+		CCNA_01598	0.89	-0.9
1,720,693	+		CCNA_01598	0.89	-1.1
1,720,701	-		CCNA_01598	0.89	-1.0
1,720,701	-		CCNA_01598	0.89	+1.0
1,720,701	-		CCNA_01598	0.89	-0.4
1,720,709	+				+1.1
1,720,751	-				+0.3
1,720,762	-				-2.1
1,720,862	-				+0.4
1,720,862	-				-0.9
1,720,862	-				-1.3
1,720,862	-				+1.0
1,720,891	+				-0.3
1,720,899	-				-0.3
1,720,904	-				-0.2
1,720,932	-				-1.6
1,720,932	-				-0.6
1,720,932	-				-0.8
1,720,932	-				-0.1
1,720,932	-				-0.5
1,720,933	-				+0.4
1,720,993	+				+1.2
1,721,008	-		CCNA_01599	0.46	+1.2
1,721,011	+		CCNA_01599	0.47	-1.7
1,721,019	-		CCNA_01599	0.52	+0.9
1,721,026	+		CCNA_01599	0.56	-1.8
1,721,026	+		CCNA_01599	0.56	-1.8
1,721,054	+		CCNA_01599	0.72	-0.3
1,721,054	+		CCNA_01599	0.72	-1.0
1,721,060	+		CCNA_01599	0.75	-1.8
1,721,060	+		CCNA_01599	0.75	-0.1
1,721,062	-		CCNA_01599	0.76	+1.8
1,721,068	-		CCNA_01599	0.80	-0.4
1,721,068	-		CCNA_01599	0.80	-1.3
1,721,075	+		CCNA_01599	0.84	-1.3
1,721,077	-		CCNA_01599	0.85	+1.9
1,721,080	+		CCNA_01599	0.86	+1.2
1,721,105	+				-0.9
1,721,121	-				-0.5
1,721,121	-				+1.4
1,721,140	+				-0.1
1,721,170	-				-0.8
1,721,181	+				-0.1
1,721,204	+		CCNA_01600	0.10	-0.8
1,721,211	+		CCNA_01600	0.11	-0.8
1,721,211	+		CCNA_01600	0.11	-0.9
1,721,211	+		CCNA_01600	0.11	+0.5
1,721,211	+		CCNA_01600	0.11	-1.9
1,721,219	-		CCNA_01600	0.12	+2.0
1,721,219	-		CCNA_01600	0.12	-2.4
1,721,219	-		CCNA_01600	0.12	+0.8
1,721,240	-		CCNA_01600	0.14	-0.6
1,721,240	-		CCNA_01600	0.14	+2.1
1,721,240	-		CCNA_01600	0.14	-1.7
1,721,255	-		CCNA_01600	0.16	+0.4
1,721,282	-		CCNA_01600	0.19	+0.7
1,721,325	+		CCNA_01600	0.24	-1.7
1,721,325	+		CCNA_01600	0.24	-0.2
1,721,333	-		CCNA_01600	0.25	+0.7
1,721,333	-		CCNA_01600	0.25	-0.4
1,721,333	-		CCNA_01600	0.25	-0.6
1,721,333	-		CCNA_01600	0.25	+0.2
1,721,333	-		CCNA_01600	0.25	-0.2
1,721,399	-		CCNA_01600	0.32	-0.5
1,721,404	+		CCNA_01600	0.32	-1.2
1,721,470	-		CCNA_01600	0.40	-0.5
1,721,471	-		CCNA_01600	0.40	-1.0
1,721,544	-		CCNA_01600	0.48	+0.8
1,721,544	-		CCNA_01600	0.48	-0.5
1,721,563	+		CCNA_01600	0.50	-1.3
1,721,563	+		CCNA_01600	0.50	-0.6
1,721,563	+		CCNA_01600	0.50	+0.1
1,721,566	-		CCNA_01600	0.50	+0.8
1,721,568	+		CCNA_01600	0.50	-2.1
1,721,568	+		CCNA_01600	0.50	-1.2
1,721,568	+		CCNA_01600	0.50	-1.1
1,721,571	-		CCNA_01600	0.51	-1.1
1,721,618	-		CCNA_01600	0.56	-0.3
1,721,720	+		CCNA_01600	0.67	-0.8
1,721,728	-		CCNA_01600	0.68	+0.7
1,721,775	-		CCNA_01600	0.73	-2.3
1,721,783	+		CCNA_01600	0.74	+0.4
1,721,796	-		CCNA_01600	0.76	+1.1
1,721,808	-		CCNA_01600	0.77	-0.5