Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01109

Experiment: PYE with Chlorite 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chlorite 0.5 mM
1,212,999	+		CCNA_01108	0.40	+0.3
1,213,003	+		CCNA_01108	0.41	-2.1
1,213,007	-		CCNA_01108	0.41	+0.4
1,213,020	+		CCNA_01108	0.43	+1.1
1,213,038	-		CCNA_01108	0.45	+1.1
1,213,043	-		CCNA_01108	0.46	+0.6
1,213,048	-		CCNA_01108	0.46	+0.2
1,213,077	-		CCNA_01108	0.49	+1.5
1,213,079	+		CCNA_01108	0.50	+0.2
1,213,082	-		CCNA_01108	0.50	+0.7
1,213,082	-		CCNA_01108	0.50	+0.2
1,213,090	+		CCNA_01108	0.51	-0.4
1,213,104	-		CCNA_01108	0.53	+1.8
1,213,105	+		CCNA_01108	0.53	-0.1
1,213,105	-		CCNA_01108	0.53	+0.1
1,213,125	-		CCNA_01108	0.55	+0.8
1,213,143	+		CCNA_01108	0.57	-1.8
1,213,150	+		CCNA_01108	0.58	-1.3
1,213,173	-		CCNA_01108	0.61	+0.5
1,213,173	-		CCNA_01108	0.61	-1.2
1,213,194	+		CCNA_01108	0.63	-0.8
1,213,229	+		CCNA_01108	0.67	-0.5
1,213,229	+		CCNA_01108	0.67	+0.3
1,213,229	+		CCNA_01108	0.67	+0.1
1,213,234	+		CCNA_01108	0.68	-1.1
1,213,234	+		CCNA_01108	0.68	-1.0
1,213,234	+		CCNA_01108	0.68	+0.3
1,213,234	+		CCNA_01108	0.68	-0.0
1,213,237	-		CCNA_01108	0.68	+1.9
1,213,237	-		CCNA_01108	0.68	+0.3
1,213,239	+		CCNA_01108	0.68	-0.1
1,213,240	+		CCNA_01108	0.68	-0.3
1,213,240	+		CCNA_01108	0.68	+0.5
1,213,240	+		CCNA_01108	0.68	-2.3
1,213,240	+		CCNA_01108	0.68	-0.4
1,213,240	+		CCNA_01108	0.68	-0.4
1,213,242	-		CCNA_01108	0.69	+0.8
1,213,242	-		CCNA_01108	0.69	-1.9
1,213,242	-		CCNA_01108	0.69	+1.1
1,213,242	-		CCNA_01108	0.69	-1.0
1,213,242	-		CCNA_01108	0.69	+0.6
1,213,242	-		CCNA_01108	0.69	-0.3
1,213,242	-		CCNA_01108	0.69	+1.3
1,213,242	-		CCNA_01108	0.69	+1.1
1,213,242	-		CCNA_01108	0.69	+0.7
1,213,248	-		CCNA_01108	0.69	+0.6
1,213,248	-		CCNA_01108	0.69	-0.6
1,213,248	-		CCNA_01108	0.69	-1.3
1,213,248	-		CCNA_01108	0.69	-0.4
1,213,248	-		CCNA_01108	0.69	+0.0
1,213,248	-		CCNA_01108	0.69	-0.8
1,213,248	-		CCNA_01108	0.69	-0.2
1,213,275	-		CCNA_01108	0.72	+0.0
1,213,275	-		CCNA_01108	0.72	+0.5
1,213,280	+		CCNA_01108	0.73	+0.2
1,213,297	-		CCNA_01108	0.75	+1.1
1,213,311	+		CCNA_01108	0.77	-0.5
1,213,404	+		CCNA_01108	0.87	-1.5
1,213,404	+		CCNA_01108	0.87	-2.0
1,213,407	-		CCNA_01108	0.88	+0.5
1,213,407	-		CCNA_01108	0.88	+0.7
1,213,409	+		CCNA_01108	0.88	-0.8
1,213,409	+		CCNA_01108	0.88	+1.6
1,213,409	+		CCNA_01108	0.88	-1.5
1,213,412	-		CCNA_01108	0.88	-0.6
1,213,417	-		CCNA_01108	0.89	+0.4
1,213,417	-		CCNA_01108	0.89	+0.8
1,213,417	-		CCNA_01108	0.89	+1.4
1,213,424	-		CCNA_01108	0.90	+0.1
1,213,445	-				+1.2
1,213,445	-				+1.9
1,213,449	+				-0.9
1,213,457	-				+0.8
1,213,472	-				-1.9
1,213,480	+				-1.3
1,213,483	-				+0.9
1,213,483	-				+1.1
1,213,485	+				-0.9
1,213,488	-				+0.5
1,213,493	-				+0.5
1,213,493	-				-0.1
1,213,503	-				+0.6
1,213,518	+				-0.9
1,213,541	+				+2.1
1,213,549	-				+0.4
1,213,549	-				+1.6
1,213,549	-				-0.2
1,213,566	+				-0.6
1,213,567	+				+0.2
1,213,575	-				-0.3
1,213,599	+				+0.5
1,213,599	+				-0.6
1,213,608	-				+0.2
1,213,697	+		CCNA_R0026	0.19	+0.3
1,213,697	+		CCNA_R0026	0.19	+1.3
1,213,777	+				+1.7
1,213,777	+				+2.1
1,213,781	+				+2.5
1,213,907	-				-0.7
1,213,964	+				-0.3
1,213,977	+				+0.6
1,213,977	+				+0.6
1,213,985	-				+2.1
1,214,008	+				+0.7
1,214,018	+				-0.3
1,214,040	-				-0.9
1,214,049	+				+0.6
1,214,049	+				+0.7
1,214,106	+				+0.4
1,214,114	+				+0.3
1,214,131	-				+1.2
1,214,205	+		CCNA_01109	0.13	+0.1
1,214,205	+		CCNA_01109	0.13	-0.2
1,214,213	-		CCNA_01109	0.13	-0.6
1,214,234	-		CCNA_01109	0.14	-2.4
1,214,234	-		CCNA_01109	0.14	-0.4
1,214,261	-		CCNA_01109	0.16	+0.2
1,214,286	+		CCNA_01109	0.17	+1.1
1,214,289	-		CCNA_01109	0.17	-0.2
1,214,294	-		CCNA_01109	0.17	-1.2
1,214,296	+		CCNA_01109	0.18	+0.1
1,214,296	+		CCNA_01109	0.18	+1.0
1,214,296	+		CCNA_01109	0.18	+1.0
1,214,309	-		CCNA_01109	0.18	-0.3
1,214,374	+		CCNA_01109	0.22	+0.5
1,214,374	+		CCNA_01109	0.22	+0.4
1,214,382	-		CCNA_01109	0.22	-1.6
1,214,382	-		CCNA_01109	0.22	-2.1
1,214,382	-		CCNA_01109	0.22	+0.0
1,214,382	-				+1.4
1,214,393	+		CCNA_01109	0.23	+0.3
1,214,408	-		CCNA_01109	0.24	-1.9
1,214,408	-		CCNA_01109	0.24	-2.6
1,214,408	-		CCNA_01109	0.24	-1.1
1,214,439	+		CCNA_01109	0.26	+1.3
1,214,439	+		CCNA_01109	0.26	+0.5
1,214,439	+		CCNA_01109	0.26	-0.5
1,214,447	-		CCNA_01109	0.26	+0.4
1,214,447	-		CCNA_01109	0.26	+0.1
1,214,503	+		CCNA_01109	0.29	+1.1
1,214,536	+		CCNA_01109	0.31	-0.3
1,214,536	+		CCNA_01109	0.31	+0.9
1,214,536	+		CCNA_01109	0.31	+0.9
1,214,536	+		CCNA_01109	0.31	+0.2
1,214,630	-		CCNA_01109	0.36	-0.6
1,214,634	-		CCNA_01109	0.36	-0.6
1,214,636	+		CCNA_01109	0.37	+0.6
1,214,668	+		CCNA_01109	0.38	+0.5
1,214,676	-		CCNA_01109	0.39	+0.0
1,214,676	-		CCNA_01109	0.39	-0.4
1,214,686	-		CCNA_01109	0.39	-0.4
1,214,709	+		CCNA_01109	0.41	+1.3
1,214,731	-		CCNA_01109	0.42	-0.2
1,214,740	+		CCNA_01109	0.42	+0.6
1,214,740	+		CCNA_01109	0.42	-0.3
1,214,740	+		CCNA_01109	0.42	+1.2
1,214,740	+		CCNA_01109	0.42	+2.0
1,214,740	+		CCNA_01109	0.42	+0.7
1,214,747	+		CCNA_01109	0.43	-0.8
1,214,748	-		CCNA_01109	0.43	+0.9
1,214,748	-		CCNA_01109	0.43	-1.4
1,214,748	-		CCNA_01109	0.43	+0.4
1,214,756	+		CCNA_01109	0.43	+0.1
1,214,789	-		CCNA_01109	0.45	+1.1
1,214,812	+		CCNA_01109	0.46	-0.5
1,214,820	+		CCNA_01109	0.47	+1.2
1,214,857	+		CCNA_01109	0.49	+0.7
1,214,861	-		CCNA_01109	0.49	+0.9
1,214,915	-		CCNA_01109	0.52	-0.7
1,214,958	+		CCNA_01109	0.55	+0.4
1,215,039	+		CCNA_01109	0.59	-0.1
1,215,060	+		CCNA_01109	0.60	+1.1
1,215,060	+		CCNA_01109	0.60	+0.9
1,215,060	+		CCNA_01109	0.60	+2.3
1,215,060	+		CCNA_01109	0.60	+0.3
1,215,060	+		CCNA_01109	0.60	-0.6
1,215,060	+		CCNA_01109	0.60	+0.2
1,215,060	+		CCNA_01109	0.60	+0.2
1,215,060	+		CCNA_01109	0.60	+1.7
1,215,060	+		CCNA_01109	0.60	+0.2
1,215,060	+		CCNA_01109	0.60	+1.1
1,215,060	+		CCNA_01109	0.60	+0.4
1,215,068	-		CCNA_01109	0.61	+0.3
1,215,068	-		CCNA_01109	0.61	-0.4
1,215,068	-		CCNA_01109	0.61	-1.4
1,215,068	-		CCNA_01109	0.61	-0.6
1,215,068	-		CCNA_01109	0.61	+1.2
1,215,087	-		CCNA_01109	0.62	-0.4
1,215,097	-		CCNA_01109	0.62	+1.2
1,215,107	-		CCNA_01109	0.63	+0.4
1,215,168	-		CCNA_01109	0.66	-1.8
1,215,176	+		CCNA_01109	0.67	-1.1
1,215,184	-		CCNA_01109	0.67	-0.9
1,215,184	-		CCNA_01109	0.67	+0.4
1,215,209	+		CCNA_01109	0.69	+0.6
1,215,227	-		CCNA_01109	0.70	-1.7
1,215,247	-		CCNA_01109	0.71	+1.7
1,215,247	-		CCNA_01109	0.71	+0.9
1,215,251	-		CCNA_01109	0.71	-1.2
1,215,261	-		CCNA_01109	0.71	-1.2
1,215,270	+		CCNA_01109	0.72	+0.3
1,215,270	+		CCNA_01109	0.72	+0.6
1,215,278	-		CCNA_01109	0.72	-0.1
1,215,278	-		CCNA_01109	0.72	-1.1
1,215,321	+		CCNA_01109	0.75	+0.4
1,215,321	+		CCNA_01109	0.75	+1.7
1,215,321	+		CCNA_01109	0.75	+0.8
1,215,377	+		CCNA_01109	0.78	+0.9
1,215,377	+		CCNA_01109	0.78	+0.4
1,215,377	+		CCNA_01109	0.78	+0.1
1,215,377	+		CCNA_01109	0.78	+1.8
1,215,377	+		CCNA_01109	0.78	+0.2
1,215,377	+		CCNA_01109	0.78	+0.0
1,215,377	+		CCNA_01109	0.78	+0.9
1,215,385	-		CCNA_01109	0.78	+0.2
1,215,385	-		CCNA_01109	0.78	-0.3
1,215,395	-		CCNA_01109	0.79	-0.8
1,215,457	+		CCNA_01109	0.82	+0.8
1,215,458	-		CCNA_01109	0.82	-0.4
1,215,464	+		CCNA_01109	0.83	+0.4
1,215,469	+		CCNA_01109	0.83	+0.3
1,215,469	+		CCNA_01109	0.83	+1.4
1,215,469	+		CCNA_01109	0.83	+1.0
1,215,469	+		CCNA_01109	0.83	+0.0
1,215,474	+		CCNA_01109	0.83	+1.4
1,215,497	+		CCNA_01109	0.85	+0.1
1,215,505	-		CCNA_01109	0.85	-1.0
1,215,554	-		CCNA_01109	0.88	-1.1
1,215,556	+		CCNA_01109	0.88	+0.6
1,215,556	+		CCNA_01109	0.88	+0.7
1,215,557	+		CCNA_01109	0.88	+1.4
1,215,557	+		CCNA_01109	0.88	+1.0
1,215,562	+		CCNA_01109	0.88	+0.0
1,215,567	+		CCNA_01109	0.89	+1.6
1,215,585	+		CCNA_01109	0.90	+0.8
1,215,585	+		CCNA_01109	0.90	+1.6
1,215,593	+				+0.9
1,215,593	+				+1.2
1,215,601	-				+1.4
1,215,603	+				+1.1
1,215,603	+				+0.6
1,215,635	+				+0.7
1,215,692	-				-0.1
1,215,724	+				+1.8
1,215,724	+				+1.2
1,215,732	-				+0.4
1,215,732	-				+0.4
1,215,772	+				+0.9
1,215,782	+				+1.1
1,215,789	+				+1.2
1,215,789	+				+1.2
1,215,794	+				+0.8
1,215,797	-				+1.7
1,215,800	+				+1.0
1,215,800	+				+1.1
1,215,800	+				+0.3
1,215,807	+				+0.1
1,215,808	-				-1.4
1,215,808	-				-2.1
1,215,887	+		CCNA_01110	0.12	+1.0
1,215,900	-		CCNA_01110	0.14	-1.5
1,215,928	-		CCNA_01110	0.17	-0.4
1,215,928	-				+0.4
1,215,931	+				+0.0
1,215,944	-		CCNA_01110	0.18	-1.5
1,215,972	+		CCNA_01110	0.21	+0.4
1,215,987	+		CCNA_01110	0.23	-1.1
1,215,987	+		CCNA_01110	0.23	-0.4
1,216,014	+		CCNA_01110	0.26	+1.2
1,216,022	-		CCNA_01110	0.27	-1.1
1,216,033	+		CCNA_01110	0.28	+1.0
1,216,047	+		CCNA_01110	0.29	+1.1
1,216,055	-		CCNA_01110	0.30	-1.9
1,216,079	+		CCNA_01110	0.33	-0.1
1,216,098	-		CCNA_01110	0.35	-0.3
1,216,157	-		CCNA_01110	0.41	-0.9
1,216,323	+		CCNA_01110	0.59	+0.6
1,216,333	-		CCNA_01110	0.60	-1.1
1,216,362	-		CCNA_01110	0.63	+0.9
1,216,362	-		CCNA_01110	0.63	-0.4
1,216,401	+		CCNA_01110	0.68	-0.0
1,216,401	+		CCNA_01110	0.68	-0.4
1,216,409	-		CCNA_01110	0.69	-0.4
1,216,409	-		CCNA_01110	0.69	-1.2
1,216,443	-		CCNA_01110	0.72	+2.0
1,216,460	+		CCNA_01110	0.74	+1.3
1,216,475	+		CCNA_01110	0.76	-0.3
1,216,485	+		CCNA_01110	0.77	+0.9
1,216,485	+		CCNA_01110	0.77	+1.5
1,216,485	+		CCNA_01110	0.77	+0.7
1,216,485	+		CCNA_01110	0.77	+1.4
1,216,485	+		CCNA_01110	0.77	+0.8
1,216,493	-		CCNA_01110	0.78	-1.4
1,216,506	-		CCNA_01110	0.79	+0.2
1,216,520	+		CCNA_01110	0.80	+1.2
1,216,520	+		CCNA_01110	0.80	+1.0
1,216,520	+		CCNA_01110	0.80	+1.3
1,216,520	+		CCNA_01110	0.80	-0.2
1,216,520	+		CCNA_01110	0.80	+0.9
1,216,520	+		CCNA_01110	0.80	+1.2
1,216,520	+		CCNA_01110	0.80	+1.0
1,216,528	-		CCNA_01110	0.81	-1.1
1,216,528	-		CCNA_01110	0.81	+0.1
1,216,528	-		CCNA_01110	0.81	+0.6
1,216,528	-		CCNA_01110	0.81	+2.4
1,216,541	-		CCNA_01110	0.83	+0.2
1,216,563	-		CCNA_01110	0.85	-0.9
1,216,601	+		CCNA_01110	0.89	+0.2
1,216,601	+		CCNA_01110	0.89	+1.6
1,216,601	+		CCNA_01110	0.89	+0.8
1,216,628	-				-1.6
1,216,680	+				+0.5
1,216,689	+				+0.7
1,216,689	+				+0.1
1,216,689	+				+1.4
1,216,689	+				+0.9
1,216,689	+				+1.3
1,216,689	+				+0.0
1,216,696	+				+0.8
1,216,697	-				-1.6
1,216,697	-				+2.0
1,216,697	-				+0.1
1,216,697	-				-0.1