Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11040

Experiment: Nalidixic 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.02 mg/ml
2,452,312	+		ABZR86_RS11035	0.71	-0.0
2,452,313	-		ABZR86_RS11035	0.71	-0.3
2,452,421	+		ABZR86_RS11035	0.82	-0.3
2,452,421	+		ABZR86_RS11035	0.82	+0.0
2,452,422	-		ABZR86_RS11035	0.82	-0.1
2,452,422	-		ABZR86_RS11035	0.82	-0.5
2,452,422	-		ABZR86_RS11035	0.82	-1.8
2,452,468	+		ABZR86_RS11035	0.87	-0.3
2,452,469	-		ABZR86_RS11035	0.87	-0.4
2,452,469	-		ABZR86_RS11035	0.87	-0.3
2,452,469	-		ABZR86_RS11035	0.87	+0.3
2,452,469	-		ABZR86_RS11035	0.87	+0.1
2,452,469	-		ABZR86_RS11035	0.87	-0.6
2,452,469	-		ABZR86_RS11035	0.87	-0.2
2,452,564	-				-0.5
2,452,842	+				-0.3
2,452,942	+				-0.3
2,452,942	+				+0.2
2,452,942	+				-0.1
2,452,942	+				+0.2
2,452,943	-				-0.2
2,452,943	-				-0.0
2,452,943	-				+0.3
2,452,943	-				+0.2
2,452,943	-				+0.8
2,452,943	-				-0.7
2,452,943	-				-0.4
2,452,943	-				-0.7
2,453,195	-				+0.1
2,453,195	-				-0.3
2,453,420	+		ABZR86_RS11040	0.15	-0.1
2,453,420	+		ABZR86_RS11040	0.15	-0.2
2,453,420	+		ABZR86_RS11040	0.15	-0.2
2,453,420	+		ABZR86_RS11040	0.15	+0.0
2,453,420	+		ABZR86_RS11040	0.15	-0.0
2,453,421	-		ABZR86_RS11040	0.15	+0.5
2,453,421	-		ABZR86_RS11040	0.15	-0.3
2,453,421	-		ABZR86_RS11040	0.15	+0.5
2,453,421	-		ABZR86_RS11040	0.15	+0.1
2,453,476	+		ABZR86_RS11040	0.17	-0.6
2,453,476	+		ABZR86_RS11040	0.17	+0.3
2,453,476	+		ABZR86_RS11040	0.17	+1.3
2,453,476	+		ABZR86_RS11040	0.17	+0.3
2,453,476	+		ABZR86_RS11040	0.17	+0.1
2,453,476	+		ABZR86_RS11040	0.17	-0.0
2,453,476	+		ABZR86_RS11040	0.17	-0.0
2,453,477	-		ABZR86_RS11040	0.17	+0.0
2,453,631	+		ABZR86_RS11040	0.22	-0.1
2,453,631	+		ABZR86_RS11040	0.22	+0.0
2,453,631	+		ABZR86_RS11040	0.22	-0.1
2,453,632	-		ABZR86_RS11040	0.22	+0.3
2,453,737	+		ABZR86_RS11040	0.25	-0.0
2,453,737	+		ABZR86_RS11040	0.25	-1.2
2,453,738	-		ABZR86_RS11040	0.25	-0.2
2,453,738	-		ABZR86_RS11040	0.25	-0.0
2,453,738	-		ABZR86_RS11040	0.25	-0.6
2,453,782	+		ABZR86_RS11040	0.27	+0.7
2,453,783	-		ABZR86_RS11040	0.27	-0.1
2,453,791	+		ABZR86_RS11040	0.27	-0.3
2,453,791	+		ABZR86_RS11040	0.27	+0.3
2,454,064	+		ABZR86_RS11040	0.36	+0.1
2,454,065	-		ABZR86_RS11040	0.36	-0.0
2,454,076	+		ABZR86_RS11040	0.36	+0.6
2,454,076	+		ABZR86_RS11040	0.36	-1.2
2,454,076	+		ABZR86_RS11040	0.36	+0.1
2,454,077	-		ABZR86_RS11040	0.36	-0.0
2,454,077	-		ABZR86_RS11040	0.36	+0.0
2,454,223	+		ABZR86_RS11040	0.41	-0.2
2,454,223	+		ABZR86_RS11040	0.41	-0.4
2,454,262	+		ABZR86_RS11040	0.42	+0.0
2,454,263	-		ABZR86_RS11040	0.42	+0.3
2,454,265	+		ABZR86_RS11040	0.42	+0.1
2,454,266	-		ABZR86_RS11040	0.42	+0.4
2,454,286	+		ABZR86_RS11040	0.43	-0.1
2,454,286	+		ABZR86_RS11040	0.43	-0.2
2,454,287	-		ABZR86_RS11040	0.43	-0.1
2,454,325	+		ABZR86_RS11040	0.44	+0.3
2,454,326	-		ABZR86_RS11040	0.44	+0.1
2,454,475	+		ABZR86_RS11040	0.49	-0.5
2,454,502	+		ABZR86_RS11040	0.50	+1.7
2,454,503	-		ABZR86_RS11040	0.50	+0.5
2,454,503	-		ABZR86_RS11040	0.50	-1.2
2,454,503	-		ABZR86_RS11040	0.50	+0.4
2,454,583	+		ABZR86_RS11040	0.53	+0.2
2,454,583	+		ABZR86_RS11040	0.53	+0.1
2,454,584	-		ABZR86_RS11040	0.53	-0.6
2,454,584	-		ABZR86_RS11040	0.53	+0.2
2,454,658	+		ABZR86_RS11040	0.55	-0.3
2,454,658	+		ABZR86_RS11040	0.55	+0.7
2,454,658	+		ABZR86_RS11040	0.55	-0.3
2,454,659	-		ABZR86_RS11040	0.55	+1.5
2,454,799	+		ABZR86_RS11040	0.60	+0.3
2,454,799	+		ABZR86_RS11040	0.60	+0.4
2,454,800	-		ABZR86_RS11040	0.60	+0.6
2,454,800	-		ABZR86_RS11040	0.60	+0.0
2,454,896	-		ABZR86_RS11040	0.63	-0.3
2,454,898	+		ABZR86_RS11040	0.63	-0.0
2,454,898	+		ABZR86_RS11040	0.63	+0.1
2,454,898	+		ABZR86_RS11040	0.63	+0.5
2,454,898	+		ABZR86_RS11040	0.63	+0.4
2,454,991	+		ABZR86_RS11040	0.66	-0.0
2,455,234	+		ABZR86_RS11040	0.74	-1.2
2,455,234	+		ABZR86_RS11040	0.74	-1.5
2,455,234	+		ABZR86_RS11040	0.74	+0.2
2,455,546	+		ABZR86_RS11040	0.84	-0.2
2,455,546	+		ABZR86_RS11040	0.84	-0.4
2,455,591	+		ABZR86_RS11040	0.85	+0.1
2,455,592	-		ABZR86_RS11040	0.85	+0.5
2,455,592	-		ABZR86_RS11040	0.85	+0.4
2,455,594	+		ABZR86_RS11040	0.85	+0.1
2,455,594	+		ABZR86_RS11040	0.85	-0.3
2,455,757	-				+1.1
2,456,053	+				+0.3
2,456,053	+				+0.2
2,456,053	+				+1.4
2,456,053	+				+0.4
2,456,054	-				-0.1
2,456,054	-				+0.1
2,456,144	+				+1.3
2,456,144	+				-0.2
2,456,144	+				+0.4
2,456,144	+				+2.7
2,456,144	+				-0.0
2,456,145	-				+1.0
2,456,335	-				-0.2
2,456,335	-				-0.5
2,456,496	+		ABZR86_RS11045	0.16	-0.5
2,456,496	+		ABZR86_RS11045	0.16	+0.1
2,456,497	-		ABZR86_RS11045	0.16	+0.1
2,456,716	-		ABZR86_RS11045	0.25	-0.0
2,456,716	-		ABZR86_RS11045	0.25	+0.8
2,457,016	-		ABZR86_RS11045	0.36	+0.0
2,457,027	+		ABZR86_RS11045	0.37	+0.3
2,457,027	+		ABZR86_RS11045	0.37	-1.0
2,457,027	+		ABZR86_RS11045	0.37	-0.1