Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10535

Experiment: Nalidixic 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.02 mg/ml
2,341,085	-		ABZR86_RS10530	0.48	-1.1
2,341,340	+				+0.6
2,341,609	+				-0.6
2,341,693	+				-0.3
2,341,730	-				+0.4
2,341,888	+				-0.1
2,341,889	-				+0.2
2,341,889	-				-0.5
2,341,889	-				+0.1
2,342,067	-				-1.2
2,342,093	-				+1.6
2,342,109	+				+0.6
2,342,152	+		ABZR86_RS10535	0.13	+0.7
2,342,202	+		ABZR86_RS10535	0.17	+0.0
2,342,202	+		ABZR86_RS10535	0.17	+0.4
2,342,203	-		ABZR86_RS10535	0.17	+0.3
2,342,203	-		ABZR86_RS10535	0.17	+1.1
2,342,304	+		ABZR86_RS10535	0.24	+0.2
2,342,305	-		ABZR86_RS10535	0.24	-0.2
2,342,305	-		ABZR86_RS10535	0.24	-0.1
2,342,305	-		ABZR86_RS10535	0.24	+0.8
2,342,305	-		ABZR86_RS10535	0.24	+0.5
2,342,305	-		ABZR86_RS10535	0.24	+0.4
2,342,445	+		ABZR86_RS10535	0.35	+0.1
2,342,445	+		ABZR86_RS10535	0.35	+0.9
2,342,446	-		ABZR86_RS10535	0.35	+0.9
2,342,845	-		ABZR86_RS10535	0.66	+0.4
2,342,845	-		ABZR86_RS10535	0.66	+0.6
2,343,161	-		ABZR86_RS10535	0.90	+0.3
2,343,165	+				+0.4
2,343,211	+				-0.5
2,343,307	+				+0.2
2,343,330	+				-0.2
2,343,397	+				-0.8
2,343,397	+				-0.3
2,343,398	-				+0.4
2,343,398	-				-0.1
2,343,522	+		ABZR86_RS10540	0.34	-0.2
2,343,523	-		ABZR86_RS10540	0.34	-2.0
2,343,523	-		ABZR86_RS10540	0.34	-0.3
2,343,523	-		ABZR86_RS10540	0.34	+0.1
2,343,612	+		ABZR86_RS10540	0.54	-0.4
2,343,612	+		ABZR86_RS10540	0.54	-0.8
2,343,612	+		ABZR86_RS10540	0.54	-1.6
2,343,613	-		ABZR86_RS10540	0.54	-0.1
2,343,736	-		ABZR86_RS10540	0.82	+0.7
2,343,736	-		ABZR86_RS10540	0.82	+0.2
2,343,792	+				+0.1
2,343,792	+				+0.4
2,343,793	-				-0.5
2,344,019	+		ABZR86_RS10545	0.18	+0.5
2,344,019	+		ABZR86_RS10545	0.18	-0.1
2,344,019	+		ABZR86_RS10545	0.18	+0.4
2,344,020	-		ABZR86_RS10545	0.18	-0.2
2,344,020	-		ABZR86_RS10545	0.18	+0.3
2,344,037	+		ABZR86_RS10545	0.20	+0.2
2,344,038	-		ABZR86_RS10545	0.20	+0.1
2,344,038	-		ABZR86_RS10545	0.20	+0.2