Experiment: Nalidixic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10505 and ABZR86_RS10510 are separated by 4 nucleotides ABZR86_RS10510 and ABZR86_RS10515 overlap by 4 nucleotides ABZR86_RS10515 and ABZR86_RS10520 are separated by 116 nucleotides ABZR86_RS10520 and ABZR86_RS10525 are separated by 273 nucleotides
ABZR86_RS10505: ABZR86_RS10505 - ribosomal protein S18-alanine N-acetyltransferase, at 2,336,340 to 2,336,810
_RS10505
ABZR86_RS10510: ABZR86_RS10510 - hypothetical protein, at 2,336,815 to 2,337,300
_RS10510
ABZR86_RS10515: ABZR86_RS10515 - phosphatidylcholine/phosphatidylserine synthase, at 2,337,297 to 2,338,070
_RS10515
ABZR86_RS10520: ABZR86_RS10520 - DUF4124 domain-containing protein, at 2,338,187 to 2,338,639
_RS10520
ABZR86_RS10525: ABZR86_RS10525 - proline--tRNA ligase, at 2,338,913 to 2,340,610
_RS10525
Position (kb)
2337
2338
2339 Strain fitness (log2 ratio)
-2
-1
0
1 at 2336.405 kb on - strand, within ABZR86_RS10505 at 2336.405 kb on - strand, within ABZR86_RS10505 at 2336.405 kb on - strand, within ABZR86_RS10505 at 2336.405 kb on - strand, within ABZR86_RS10505 at 2336.447 kb on - strand, within ABZR86_RS10505 at 2338.101 kb on + strand at 2338.101 kb on + strand at 2338.121 kb on - strand at 2338.121 kb on - strand at 2338.135 kb on + strand at 2338.135 kb on + strand at 2338.136 kb on - strand at 2338.136 kb on - strand at 2338.136 kb on - strand at 2338.136 kb on - strand at 2338.167 kb on + strand at 2338.167 kb on + strand at 2338.167 kb on + strand at 2338.167 kb on + strand at 2338.168 kb on - strand at 2338.168 kb on - strand at 2338.168 kb on - strand at 2338.266 kb on - strand, within ABZR86_RS10520 at 2338.298 kb on + strand, within ABZR86_RS10520 at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.614 kb on - strand at 2338.622 kb on + strand at 2338.623 kb on - strand at 2338.623 kb on - strand at 2338.637 kb on + strand at 2338.638 kb on - strand at 2338.638 kb on - strand at 2338.691 kb on + strand at 2338.841 kb on - strand at 2338.876 kb on - strand at 2338.876 kb on - strand at 2338.876 kb on - strand at 2338.877 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.02 mg/ml remove 2,336,405 - ABZR86_RS10505 0.14 +0.3 2,336,405 - ABZR86_RS10505 0.14 -0.1 2,336,405 - ABZR86_RS10505 0.14 -0.2 2,336,405 - ABZR86_RS10505 0.14 +0.1 2,336,447 - ABZR86_RS10505 0.23 +0.4 2,338,101 + -0.5 2,338,101 + -1.0 2,338,121 - -1.1 2,338,121 - -1.0 2,338,135 + -0.2 2,338,135 + +0.5 2,338,136 - +0.2 2,338,136 - +0.4 2,338,136 - -0.4 2,338,136 - -0.5 2,338,167 + -0.1 2,338,167 + -1.0 2,338,167 + +0.3 2,338,167 + -2.4 2,338,168 - +0.2 2,338,168 - +0.1 2,338,168 - -1.2 2,338,266 - ABZR86_RS10520 0.17 -0.2 2,338,298 + ABZR86_RS10520 0.25 +0.3 2,338,613 + +0.7 2,338,613 + -0.7 2,338,613 + -0.5 2,338,613 + -0.2 2,338,613 + +0.0 2,338,614 - -0.6 2,338,622 + -0.0 2,338,623 - +0.0 2,338,623 - +0.2 2,338,637 + -0.4 2,338,638 - +1.0 2,338,638 - +0.2 2,338,691 + +1.4 2,338,841 - -0.1 2,338,876 - +0.1 2,338,876 - -0.7 2,338,876 - +0.1 2,338,877 + +0.6
Or see this region's nucleotide sequence