Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09955

Experiment: Nalidixic 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.02 mg/ml
2,209,964	+		ABZR86_RS09950	0.54	+0.9
2,209,965	-		ABZR86_RS09950	0.54	-0.2
2,209,965	-		ABZR86_RS09950	0.54	-1.5
2,209,976	+		ABZR86_RS09950	0.55	+0.4
2,209,977	-		ABZR86_RS09950	0.55	-0.1
2,209,977	-		ABZR86_RS09950	0.55	+0.5
2,210,180	-		ABZR86_RS09950	0.67	+0.9
2,210,228	+		ABZR86_RS09950	0.70	+0.2
2,210,229	-		ABZR86_RS09950	0.70	-0.6
2,210,435	+		ABZR86_RS09950	0.82	-0.0
2,210,435	+		ABZR86_RS09950	0.82	+2.7
2,210,648	+				+0.3
2,210,649	-				+0.7
2,210,649	-				+0.5
2,210,649	-				+0.0
2,210,649	-				-0.1
2,210,649	-				+0.0
2,210,649	-				+0.2
2,210,649	-				-0.5
2,210,697	+				-2.2
2,210,698	-				-0.5
2,210,698	-				-1.4
2,210,750	+				+0.7
2,210,751	-				+1.0
2,210,751	-				-0.2
2,210,751	-				+0.7
2,210,907	+				+0.3
2,210,907	+				+0.4
2,210,907	+				-0.4
2,210,907	+				+0.7
2,210,908	-				+0.3
2,210,908	-				-0.3
2,210,937	+				-0.0
2,210,938	-				-0.2
2,210,938	-				-1.0
2,210,938	-				+0.6
2,210,938	-				-0.2
2,211,013	+		ABZR86_RS09955	0.24	-1.8
2,211,013	+		ABZR86_RS09955	0.24	+0.2
2,211,013	+		ABZR86_RS09955	0.24	-0.1
2,211,013	+		ABZR86_RS09955	0.24	-0.1
2,211,014	-		ABZR86_RS09955	0.24	+0.9
2,211,014	-		ABZR86_RS09955	0.24	+0.1
2,211,014	-		ABZR86_RS09955	0.24	-0.2
2,211,083	-		ABZR86_RS09955	0.39	-0.5
2,211,115	-		ABZR86_RS09955	0.47	+0.4
2,211,160	+		ABZR86_RS09955	0.57	-0.1
2,211,160	+		ABZR86_RS09955	0.57	+0.9
2,211,161	-		ABZR86_RS09955	0.57	-0.1
2,211,161	-		ABZR86_RS09955	0.57	+0.1
2,211,232	-		ABZR86_RS09955	0.73	+1.4
2,211,246	+		ABZR86_RS09955	0.76	-0.5
2,211,246	+		ABZR86_RS09955	0.76	-0.7
2,211,247	-		ABZR86_RS09955	0.76	-0.4
2,211,247	-		ABZR86_RS09955	0.76	+0.4
2,211,247	-		ABZR86_RS09955	0.76	-1.0
2,211,247	-		ABZR86_RS09955	0.76	-0.0
2,211,247	-		ABZR86_RS09955	0.76	-0.3
2,211,250	+		ABZR86_RS09955	0.77	+0.4
2,211,251	-		ABZR86_RS09955	0.77	-0.9
2,211,251	-		ABZR86_RS09955	0.77	+0.2
2,211,251	-		ABZR86_RS09955	0.77	+1.0
2,211,251	-		ABZR86_RS09955	0.77	+1.4
2,211,325	+				+0.5
2,211,325	+				+1.5
2,211,326	-				+0.3
2,211,349	+				+0.0
2,211,349	+				-0.5
2,211,350	-				+0.2
2,211,382	+				-0.2
2,211,382	+				+0.0
2,211,383	-				-0.5
2,211,410	-				-0.8
2,211,410	-				+0.2
2,211,438	+				+1.0
2,211,438	+				-0.0
2,211,479	+				-0.5
2,211,479	+				-0.1
2,211,480	-				-0.4
2,211,480	-				-1.2
2,211,480	-				-0.6
2,211,480	-				-0.7
2,211,492	+				+0.3
2,211,493	-				-2.1
2,211,514	+				+0.0
2,211,515	-				-0.6
2,211,547	+				-0.7
2,211,547	+				-0.2
2,211,548	-				-0.7
2,211,548	-				-0.2
2,211,548	-				-1.2
2,211,582	+				-0.2
2,211,582	+				-0.6
2,211,582	+				-0.2
2,211,582	+				+0.1
2,211,582	+				-0.9
2,211,583	-				-0.3
2,211,583	-				-1.2
2,211,583	-				-0.4
2,211,586	+				-0.6
2,211,586	+				-0.6
2,211,586	+				-0.6
2,211,586	+				-0.5
2,211,586	+				-0.1
2,211,587	-				+0.0
2,211,587	-				-1.4
2,211,587	-				+0.2
2,211,646	+				-1.2
2,211,772	+		ABZR86_RS09960	0.22	-1.6
2,211,772	+		ABZR86_RS09960	0.22	-1.6
2,211,773	-		ABZR86_RS09960	0.23	-3.0
2,211,773	-		ABZR86_RS09960	0.23	-0.3
2,211,844	+		ABZR86_RS09960	0.39	-0.2
2,211,844	+		ABZR86_RS09960	0.39	-0.6
2,211,919	+		ABZR86_RS09960	0.56	+0.6
2,211,919	+		ABZR86_RS09960	0.56	-0.2
2,211,919	+		ABZR86_RS09960	0.56	-0.6
2,211,919	+		ABZR86_RS09960	0.56	-1.0
2,211,920	-		ABZR86_RS09960	0.56	-1.0
2,212,090	+				-1.3
2,212,111	+				-0.1
2,212,111	+				-0.4
2,212,257	-				-0.1
2,212,295	+				-0.5
2,212,295	+				-0.7
2,212,296	-				+0.4
2,212,296	-				+0.1
2,212,296	-				-0.3
2,212,337	-				-1.8