Experiment: Nalidixic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09290 and ABZR86_RS09295 are separated by 78 nucleotides ABZR86_RS09295 and ABZR86_RS09300 are separated by 349 nucleotides
ABZR86_RS09290: ABZR86_RS09290 - M28 family peptidase, at 2,069,499 to 2,071,145
_RS09290
ABZR86_RS09295: ABZR86_RS09295 - nucleoside-diphosphate sugar epimerase, at 2,071,224 to 2,071,868
_RS09295
ABZR86_RS09300: ABZR86_RS09300 - C40 family peptidase, at 2,072,218 to 2,072,850
_RS09300
Position (kb)
2071
2072 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2070.459 kb on + strand, within ABZR86_RS09290 at 2070.459 kb on + strand, within ABZR86_RS09290 at 2070.459 kb on + strand, within ABZR86_RS09290 at 2070.460 kb on - strand, within ABZR86_RS09290 at 2070.460 kb on - strand, within ABZR86_RS09290 at 2070.460 kb on - strand, within ABZR86_RS09290 at 2070.460 kb on - strand, within ABZR86_RS09290 at 2070.651 kb on + strand, within ABZR86_RS09290 at 2070.652 kb on - strand, within ABZR86_RS09290 at 2070.753 kb on + strand, within ABZR86_RS09290 at 2070.777 kb on + strand, within ABZR86_RS09290 at 2070.778 kb on - strand, within ABZR86_RS09290 at 2070.897 kb on + strand, within ABZR86_RS09290 at 2070.898 kb on - strand, within ABZR86_RS09290 at 2070.963 kb on + strand, within ABZR86_RS09290 at 2070.963 kb on + strand, within ABZR86_RS09290 at 2070.964 kb on - strand, within ABZR86_RS09290 at 2071.087 kb on - strand at 2071.087 kb on - strand at 2071.144 kb on - strand at 2071.166 kb on - strand at 2071.596 kb on + strand, within ABZR86_RS09295 at 2071.597 kb on - strand, within ABZR86_RS09295 at 2071.597 kb on - strand, within ABZR86_RS09295 at 2071.866 kb on + strand at 2071.866 kb on + strand at 2071.866 kb on + strand at 2071.866 kb on + strand at 2071.988 kb on - strand at 2071.994 kb on + strand at 2072.082 kb on + strand at 2072.349 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.351 kb on + strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.352 kb on - strand, within ABZR86_RS09300 at 2072.355 kb on + strand, within ABZR86_RS09300 at 2072.355 kb on + strand, within ABZR86_RS09300 at 2072.355 kb on + strand, within ABZR86_RS09300 at 2072.355 kb on + strand, within ABZR86_RS09300 at 2072.355 kb on + strand, within ABZR86_RS09300 at 2072.356 kb on - strand, within ABZR86_RS09300 at 2072.516 kb on + strand, within ABZR86_RS09300 at 2072.516 kb on + strand, within ABZR86_RS09300 at 2072.516 kb on + strand, within ABZR86_RS09300 at 2072.517 kb on - strand, within ABZR86_RS09300 at 2072.517 kb on - strand, within ABZR86_RS09300 at 2072.517 kb on - strand, within ABZR86_RS09300 at 2072.517 kb on - strand, within ABZR86_RS09300 at 2072.517 kb on - strand, within ABZR86_RS09300 at 2072.517 kb on - strand, within ABZR86_RS09300 at 2072.573 kb on + strand, within ABZR86_RS09300 at 2072.573 kb on + strand, within ABZR86_RS09300 at 2072.573 kb on + strand, within ABZR86_RS09300 at 2072.573 kb on + strand, within ABZR86_RS09300 at 2072.574 kb on - strand, within ABZR86_RS09300
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.02 mg/ml remove 2,070,459 + ABZR86_RS09290 0.58 -0.1 2,070,459 + ABZR86_RS09290 0.58 -0.2 2,070,459 + ABZR86_RS09290 0.58 -0.2 2,070,460 - ABZR86_RS09290 0.58 +0.4 2,070,460 - ABZR86_RS09290 0.58 +0.1 2,070,460 - ABZR86_RS09290 0.58 -0.0 2,070,460 - ABZR86_RS09290 0.58 -0.2 2,070,651 + ABZR86_RS09290 0.70 -0.0 2,070,652 - ABZR86_RS09290 0.70 +0.3 2,070,753 + ABZR86_RS09290 0.76 +0.3 2,070,777 + ABZR86_RS09290 0.78 -2.4 2,070,778 - ABZR86_RS09290 0.78 -0.2 2,070,897 + ABZR86_RS09290 0.85 -0.4 2,070,898 - ABZR86_RS09290 0.85 -0.8 2,070,963 + ABZR86_RS09290 0.89 -0.1 2,070,963 + ABZR86_RS09290 0.89 -0.7 2,070,964 - ABZR86_RS09290 0.89 -1.5 2,071,087 - +0.3 2,071,087 - -1.2 2,071,144 - -0.6 2,071,166 - +0.4 2,071,596 + ABZR86_RS09295 0.58 +0.1 2,071,597 - ABZR86_RS09295 0.58 -0.5 2,071,597 - ABZR86_RS09295 0.58 +1.3 2,071,866 + +0.1 2,071,866 + +0.1 2,071,866 + +0.1 2,071,866 + +0.0 2,071,988 - -0.5 2,071,994 + +0.0 2,072,082 + -0.6 2,072,349 + ABZR86_RS09300 0.21 +0.2 2,072,351 + ABZR86_RS09300 0.21 +1.3 2,072,351 + ABZR86_RS09300 0.21 -0.3 2,072,351 + ABZR86_RS09300 0.21 +0.9 2,072,351 + ABZR86_RS09300 0.21 +0.1 2,072,351 + ABZR86_RS09300 0.21 +0.9 2,072,351 + ABZR86_RS09300 0.21 +0.7 2,072,351 + ABZR86_RS09300 0.21 +0.9 2,072,351 + ABZR86_RS09300 0.21 +1.5 2,072,351 + ABZR86_RS09300 0.21 +1.3 2,072,351 + ABZR86_RS09300 0.21 +0.5 2,072,352 - ABZR86_RS09300 0.21 +1.2 2,072,352 - ABZR86_RS09300 0.21 +0.8 2,072,352 - ABZR86_RS09300 0.21 +1.4 2,072,352 - ABZR86_RS09300 0.21 +1.2 2,072,352 - ABZR86_RS09300 0.21 +1.2 2,072,352 - ABZR86_RS09300 0.21 +2.1 2,072,352 - ABZR86_RS09300 0.21 +1.6 2,072,352 - ABZR86_RS09300 0.21 +0.7 2,072,352 - ABZR86_RS09300 0.21 +1.2 2,072,352 - ABZR86_RS09300 0.21 +1.3 2,072,352 - ABZR86_RS09300 0.21 +2.0 2,072,352 - ABZR86_RS09300 0.21 +0.7 2,072,352 - ABZR86_RS09300 0.21 +0.2 2,072,352 - ABZR86_RS09300 0.21 +1.0 2,072,352 - ABZR86_RS09300 0.21 +1.2 2,072,352 - ABZR86_RS09300 0.21 +0.2 2,072,352 - ABZR86_RS09300 0.21 +0.8 2,072,352 - ABZR86_RS09300 0.21 +1.2 2,072,352 - ABZR86_RS09300 0.21 -0.7 2,072,352 - ABZR86_RS09300 0.21 +2.3 2,072,352 - ABZR86_RS09300 0.21 +1.0 2,072,352 - ABZR86_RS09300 0.21 +0.7 2,072,352 - ABZR86_RS09300 0.21 +0.9 2,072,355 + ABZR86_RS09300 0.22 +1.0 2,072,355 + ABZR86_RS09300 0.22 +0.7 2,072,355 + ABZR86_RS09300 0.22 +0.7 2,072,355 + ABZR86_RS09300 0.22 -0.4 2,072,355 + ABZR86_RS09300 0.22 +1.7 2,072,356 - ABZR86_RS09300 0.22 +1.6 2,072,516 + ABZR86_RS09300 0.47 +0.5 2,072,516 + ABZR86_RS09300 0.47 +1.2 2,072,516 + ABZR86_RS09300 0.47 +1.2 2,072,517 - ABZR86_RS09300 0.47 +1.0 2,072,517 - ABZR86_RS09300 0.47 +2.2 2,072,517 - ABZR86_RS09300 0.47 +1.2 2,072,517 - ABZR86_RS09300 0.47 +0.8 2,072,517 - ABZR86_RS09300 0.47 +1.0 2,072,517 - ABZR86_RS09300 0.47 +1.0 2,072,573 + ABZR86_RS09300 0.56 +0.6 2,072,573 + ABZR86_RS09300 0.56 +0.7 2,072,573 + ABZR86_RS09300 0.56 +1.4 2,072,573 + ABZR86_RS09300 0.56 +0.9 2,072,574 - ABZR86_RS09300 0.56 +0.7
Or see this region's nucleotide sequence