Experiment: Nalidixic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06025 and ABZR86_RS06030 are separated by 126 nucleotides ABZR86_RS06030 and ABZR86_RS06035 are separated by 48 nucleotides ABZR86_RS06035 and ABZR86_RS06040 are separated by 408 nucleotides
ABZR86_RS06025: ABZR86_RS06025 - translation initiation factor IF-2, at 1,352,594 to 1,355,401
_RS06025
ABZR86_RS06030: ABZR86_RS06030 - transcription termination factor NusA, at 1,355,528 to 1,357,027
_RS06030
ABZR86_RS06035: ABZR86_RS06035 - ribosome maturation factor RimP, at 1,357,076 to 1,357,588
_RS06035
ABZR86_RS06040: ABZR86_RS06040 - hypothetical protein, at 1,357,997 to 1,358,314
_RS06040
Position (kb)
1355
1356
1357
1358 Strain fitness (log2 ratio)
-2
-1
0
1 at 1355.391 kb on - strand at 1355.431 kb on - strand at 1355.431 kb on - strand at 1355.431 kb on - strand at 1355.686 kb on - strand, within ABZR86_RS06030 at 1357.078 kb on - strand at 1357.078 kb on - strand at 1357.126 kb on - strand at 1357.126 kb on - strand at 1357.604 kb on - strand at 1357.649 kb on - strand at 1357.716 kb on - strand at 1357.716 kb on - strand at 1357.716 kb on - strand at 1357.716 kb on - strand at 1357.880 kb on - strand at 1357.908 kb on + strand at 1357.908 kb on + strand at 1357.909 kb on - strand at 1358.014 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.02 mg/ml remove 1,355,391 - +1.5 1,355,431 - +1.5 1,355,431 - -0.1 1,355,431 - +1.5 1,355,686 - ABZR86_RS06030 0.11 -2.0 1,357,078 - +0.6 1,357,078 - -0.5 1,357,126 - +0.2 1,357,126 - -0.8 1,357,604 - +0.1 1,357,649 - +0.8 1,357,716 - -0.4 1,357,716 - +0.7 1,357,716 - +1.0 1,357,716 - -0.5 1,357,880 - +0.7 1,357,908 + -0.7 1,357,908 + -0.0 1,357,909 - +0.1 1,358,014 + -0.4
Or see this region's nucleotide sequence