Experiment: Nalidixic 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03000 and ABZR86_RS03005 are separated by 22 nucleotides ABZR86_RS03005 and ABZR86_RS03010 overlap by 4 nucleotides ABZR86_RS03010 and ABZR86_RS03015 are separated by 522 nucleotides
ABZR86_RS03000: ABZR86_RS03000 - SDR family oxidoreductase, at 613,947 to 614,951
_RS03000
ABZR86_RS03005: ABZR86_RS03005 - YetF domain-containing protein, at 614,974 to 615,441
_RS03005
ABZR86_RS03010: ABZR86_RS03010 - cation diffusion facilitator family transporter, at 615,438 to 616,406
_RS03010
ABZR86_RS03015: ABZR86_RS03015 - hypothetical protein, at 616,929 to 617,282
_RS03015
Position (kb) 615
616
617 Strain fitness (log2 ratio) -1
0
1 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.665 kb on - strand, within ABZR86_RS03000 at 614.871 kb on + strand at 614.871 kb on + strand at 614.875 kb on + strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.904 kb on + strand at 614.904 kb on + strand at 614.905 kb on - strand at 614.963 kb on + strand at 614.964 kb on - strand at 615.005 kb on - strand at 615.005 kb on - strand at 615.005 kb on - strand at 615.034 kb on + strand, within ABZR86_RS03005 at 615.720 kb on + strand, within ABZR86_RS03010 at 615.780 kb on + strand, within ABZR86_RS03010 at 615.781 kb on - strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.059 kb on + strand, within ABZR86_RS03010 at 616.060 kb on - strand, within ABZR86_RS03010 at 616.268 kb on + strand, within ABZR86_RS03010 at 617.286 kb on + strand at 617.286 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.02 mg/ml remove 614,525 + ABZR86_RS03000 0.58 -1.0 614,525 + ABZR86_RS03000 0.58 +0.7 614,526 - ABZR86_RS03000 0.58 -0.7 614,526 - ABZR86_RS03000 0.58 -0.2 614,526 - ABZR86_RS03000 0.58 +0.1 614,665 - ABZR86_RS03000 0.71 -0.0 614,871 + -0.8 614,871 + +0.2 614,875 + +0.1 614,876 - -0.2 614,876 - -0.3 614,876 - -1.5 614,876 - -0.2 614,876 - +0.1 614,904 + -0.2 614,904 + +0.1 614,905 - +0.1 614,963 + +0.0 614,964 - -0.0 615,005 - -0.1 615,005 - +0.2 615,005 - -0.1 615,034 + ABZR86_RS03005 0.13 +1.4 615,720 + ABZR86_RS03010 0.29 +0.5 615,780 + ABZR86_RS03010 0.35 +0.6 615,781 - ABZR86_RS03010 0.35 +0.7 616,059 + ABZR86_RS03010 0.64 +0.0 616,059 + ABZR86_RS03010 0.64 +0.3 616,059 + ABZR86_RS03010 0.64 +0.2 616,059 + ABZR86_RS03010 0.64 -0.3 616,060 - ABZR86_RS03010 0.64 -0.1 616,268 + ABZR86_RS03010 0.86 -0.4 617,286 + +0.3 617,286 + +0.1
Or see this region's nucleotide sequence