Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_866
Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 993,346 | - | +2.0 | |||
| 993,346 | - | +3.0 | |||
| 993,346 | - | +0.5 | |||
| 993,487 | - | Pf1N1B4_866 | 0.22 | -0.4 | |
| 993,487 | - | Pf1N1B4_866 | 0.22 | -2.4 | |
| 993,487 | - | Pf1N1B4_866 | 0.22 | +0.0 | |
| 993,487 | - | Pf1N1B4_866 | 0.22 | -0.1 | |
| 993,884 | - | +1.5 | |||
| 993,884 | - | -1.5 | |||
| 993,884 | - | +0.4 | |||
| 993,884 | - | +1.4 | |||
| 993,990 | - | -0.2 | |||
| 994,007 | + | -0.4 | |||
| 994,007 | + | -0.5 | |||
| 994,007 | + | +2.6 | |||
| 994,142 | + | +1.6 | |||
| 994,171 | + | +0.1 | |||
| 994,172 | - | +1.1 | |||
| 994,220 | + | Pf1N1B4_867 | 0.10 | +1.3 | |
| 994,221 | - | Pf1N1B4_867 | 0.10 | +0.9 | |
| 994,221 | - | Pf1N1B4_867 | 0.10 | -1.5 | |
| 994,221 | - | Pf1N1B4_867 | 0.10 | -0.5 | |
| 994,221 | - | Pf1N1B4_867 | 0.10 | +0.5 | |
| 994,273 | + | Pf1N1B4_867 | 0.17 | +0.7 |
Or see this region's nucleotide sequence