Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_766 and Pf1N1B4_767 are separated by 76 nucleotides Pf1N1B4_767 and Pf1N1B4_768 are separated by 83 nucleotides
Pf1N1B4_766 - Glycerol uptake facilitator protein, at 870,101 to 870,910
_766
Pf1N1B4_767 - Glycerol kinase (EC 2.7.1.30), at 870,987 to 872,492
_767
Pf1N1B4_768 - Glycerol-3-phosphate regulon repressor, DeoR family, at 872,576 to 873,331
_768
Position (kb) 870
871
872
873 Strain fitness (log2 ratio) -2
-1
0
1
2 at 870.073 kb on - strand at 870.332 kb on + strand, within Pf1N1B4_766 at 870.332 kb on + strand at 870.333 kb on - strand at 871.004 kb on + strand at 871.290 kb on + strand, within Pf1N1B4_767 at 871.291 kb on - strand at 871.291 kb on - strand, within Pf1N1B4_767 at 871.291 kb on - strand, within Pf1N1B4_767 at 871.365 kb on + strand, within Pf1N1B4_767 at 871.365 kb on + strand, within Pf1N1B4_767 at 871.531 kb on + strand at 871.532 kb on - strand, within Pf1N1B4_767 at 871.545 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.774 kb on - strand, within Pf1N1B4_767 at 871.774 kb on - strand at 871.971 kb on + strand, within Pf1N1B4_767 at 871.971 kb on + strand, within Pf1N1B4_767 at 871.972 kb on - strand, within Pf1N1B4_767 at 872.007 kb on + strand, within Pf1N1B4_767 at 872.313 kb on + strand, within Pf1N1B4_767 at 872.313 kb on + strand, within Pf1N1B4_767 at 872.491 kb on - strand at 872.508 kb on + strand at 872.508 kb on + strand at 872.508 kb on + strand at 872.509 kb on - strand at 872.509 kb on - strand at 872.509 kb on - strand at 872.509 kb on - strand at 873.329 kb on + strand at 873.398 kb on + strand at 873.398 kb on + strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.399 kb on - strand at 873.401 kb on - strand at 873.401 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand at 873.474 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.004 mg/ml remove 870,073 - +0.3 870,332 + Pf1N1B4_766 0.29 -0.0 870,332 + -0.0 870,333 - -0.6 871,004 + +1.0 871,290 + Pf1N1B4_767 0.20 -0.6 871,291 - -0.0 871,291 - Pf1N1B4_767 0.20 -2.2 871,291 - Pf1N1B4_767 0.20 -1.0 871,365 + Pf1N1B4_767 0.25 -0.6 871,365 + Pf1N1B4_767 0.25 -1.6 871,531 + -1.3 871,532 - Pf1N1B4_767 0.36 -0.8 871,545 + Pf1N1B4_767 0.37 -0.8 871,773 + Pf1N1B4_767 0.52 +1.6 871,773 + Pf1N1B4_767 0.52 -0.7 871,773 + Pf1N1B4_767 0.52 -0.8 871,773 + Pf1N1B4_767 0.52 +1.0 871,774 - Pf1N1B4_767 0.52 -0.6 871,774 - -2.2 871,971 + Pf1N1B4_767 0.65 -1.0 871,971 + Pf1N1B4_767 0.65 -1.8 871,972 - Pf1N1B4_767 0.65 -0.3 872,007 + Pf1N1B4_767 0.68 -0.0 872,313 + Pf1N1B4_767 0.88 -1.3 872,313 + Pf1N1B4_767 0.88 -1.0 872,491 - +0.2 872,508 + -2.1 872,508 + -0.5 872,508 + -1.5 872,509 - -0.6 872,509 - +0.5 872,509 - -0.2 872,509 - +0.7 873,329 + -0.4 873,398 + +0.5 873,398 + +0.6 873,399 - -0.2 873,399 - -2.5 873,399 - +0.8 873,399 - -0.1 873,399 - -1.3 873,399 - +1.0 873,399 - +0.9 873,399 - -0.0 873,401 - -2.5 873,401 - -0.0 873,474 - -0.8 873,474 - +2.0 873,474 - +0.3 873,474 - +0.5 873,474 - -0.7 873,474 - +0.7
Or see this region's nucleotide sequence