Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5376

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
108,487	+		Pf1N1B4_5375	0.48	-0.3
108,487	+		Pf1N1B4_5375	0.48	+0.0
108,487	+		Pf1N1B4_5375	0.48	+1.6
108,487	+		Pf1N1B4_5375	0.48	+0.6
108,487	+		Pf1N1B4_5375	0.48	+0.8
108,487	+		Pf1N1B4_5375	0.48	+3.0
108,488	-		Pf1N1B4_5375	0.48	+1.6
108,488	-		Pf1N1B4_5375	0.48	+0.8
108,488	-		Pf1N1B4_5375	0.48	-1.3
108,535	+		Pf1N1B4_5375	0.52	-0.6
108,535	+		Pf1N1B4_5375	0.52	+0.2
108,535	+		Pf1N1B4_5375	0.52	+1.6
108,535	+		Pf1N1B4_5375	0.52	-2.0
108,535	+		Pf1N1B4_5375	0.52	-0.7
108,535	+		Pf1N1B4_5375	0.52	+0.0
108,536	-		Pf1N1B4_5375	0.52	-0.4
108,539	+		Pf1N1B4_5375	0.52	-2.0
108,539	+		Pf1N1B4_5375	0.52	+1.6
108,540	-		Pf1N1B4_5375	0.52	-0.8
108,540	-		Pf1N1B4_5375	0.52	+1.0
108,540	-				-0.6
108,569	+		Pf1N1B4_5375	0.55	-2.3
108,591	+		Pf1N1B4_5375	0.57	+1.3
108,591	+		Pf1N1B4_5375	0.57	-0.2
108,591	+		Pf1N1B4_5375	0.57	-0.4
108,609	+		Pf1N1B4_5375	0.58	+1.0
108,679	+		Pf1N1B4_5375	0.63	-0.9
108,794	+		Pf1N1B4_5375	0.72	+2.0
108,814	-		Pf1N1B4_5375	0.74	+0.4
108,989	-		Pf1N1B4_5375	0.88	-0.4
109,078	+				+1.3
109,078	+				+0.8
109,078	+				-2.2
109,079	-				-1.3
109,213	+				+2.3
109,213	+				+2.2
109,214	-				+1.0
109,300	-				+0.0
109,300	-				+0.4
109,357	+				-0.3
109,358	-		Pf1N1B4_5376	0.10	-0.3
109,361	-		Pf1N1B4_5376	0.11	+1.0
109,482	+		Pf1N1B4_5376	0.35	-1.0
109,483	-		Pf1N1B4_5376	0.35	-0.9
109,483	-		Pf1N1B4_5376	0.35	+0.3
109,612	+		Pf1N1B4_5376	0.61	-1.0
109,777	+				+0.4
109,791	+				-1.3
109,791	+				-1.0
109,791	+				-1.0
109,791	+				+1.6
109,792	-				+2.6
109,792	-				-0.4
109,792	-				-0.6
109,792	-				+1.0
109,792	-				+0.3
109,792	-				+0.1
109,966	-				+0.8
109,966	-				-1.0
109,966	-				-2.3
109,966	-				-1.6
110,005	+				-1.0
110,005	+				-0.6
110,005	+				-0.8
110,019	-				+1.4
110,154	-		Pf1N1B4_5377	0.28	-0.6
110,170	+		Pf1N1B4_5377	0.31	-0.5
110,263	-		Pf1N1B4_5377	0.50	-1.0
110,289	-		Pf1N1B4_5377	0.55	-0.1
110,390	+		Pf1N1B4_5377	0.75	+0.8
110,391	-		Pf1N1B4_5377	0.76	+0.8
110,494	-				-0.2
110,494	-				-2.2
110,494	-				-1.6
110,580	+				+1.0
110,581	-				+0.4
110,605	+				+0.8
110,605	+				-1.8
110,605	+				+0.4
110,605	+				-0.8
110,605	+				-0.8
110,605	+				+0.1
110,606	-				+1.1
110,606	-				+1.4
110,606	-				+1.8
110,606	-				-0.3
110,606	-				-0.6
110,606	-				+2.6
110,606	-				-0.3
110,606	-				-0.2
110,606	-				+0.8
110,609	+				-2.2
110,609	+				-0.2
110,609	+				+0.3
110,609	+				+1.3
110,610	-				+0.3
110,610	-				+0.0
110,653	+				+1.0
110,653	+				-1.2
110,653	+				-0.8
110,654	-				+0.4
110,654	-				-1.3
110,689	+				+0.5
110,690	-				-1.0
110,697	+				+1.4
110,697	+				+0.8
110,697	+				-1.2
110,698	-				-2.0
110,698	-				+0.6
110,698	-				+3.0
110,698	-				-1.3