Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5306

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
56,987	+				+1.4
56,988	-		Pf1N1B4_5305	0.13	-0.3
56,988	-		Pf1N1B4_5305	0.13	+0.7
56,988	-		Pf1N1B4_5305	0.13	+0.4
57,090	-		Pf1N1B4_5305	0.23	+0.2
57,090	-		Pf1N1B4_5305	0.23	+1.2
57,156	-		Pf1N1B4_5305	0.30	+0.4
57,234	-		Pf1N1B4_5305	0.38	-1.0
57,285	+				+3.0
57,285	+		Pf1N1B4_5305	0.43	+0.6
57,286	-		Pf1N1B4_5305	0.43	-0.6
57,372	+		Pf1N1B4_5305	0.52	-1.0
57,373	-		Pf1N1B4_5305	0.52	+1.4
57,558	+		Pf1N1B4_5305	0.70	+0.0
57,558	+		Pf1N1B4_5305	0.70	-1.8
57,558	+		Pf1N1B4_5305	0.70	+1.8
57,558	+		Pf1N1B4_5305	0.70	+0.1
57,559	-		Pf1N1B4_5305	0.70	-0.2
57,598	+		Pf1N1B4_5305	0.74	+1.7
57,598	+		Pf1N1B4_5305	0.74	-0.4
57,599	-		Pf1N1B4_5305	0.74	+0.0
57,643	-		Pf1N1B4_5305	0.79	-0.3
57,673	+		Pf1N1B4_5305	0.82	-0.6
57,673	+		Pf1N1B4_5305	0.82	-0.8
57,673	+		Pf1N1B4_5305	0.82	+0.2
57,673	+		Pf1N1B4_5305	0.82	+1.2
57,694	+		Pf1N1B4_5305	0.84	+1.8
57,694	+		Pf1N1B4_5305	0.84	-1.3
57,720	+		Pf1N1B4_5305	0.87	+1.0
57,721	-		Pf1N1B4_5305	0.87	-1.4
57,777	+				-0.3
57,777	+				+0.2
57,778	-				-1.1
57,778	-				+1.3
57,778	-				+2.8
57,932	-				+0.3
57,981	+		Pf1N1B4_5306	0.18	-1.6
57,982	-		Pf1N1B4_5306	0.19	-0.5
58,037	+		Pf1N1B4_5306	0.46	-2.6
58,042	-		Pf1N1B4_5306	0.49	-0.6
58,042	-		Pf1N1B4_5306	0.49	-0.8
58,140	+				+0.3
58,140	+				+0.7
58,140	+				+0.7
58,140	+				+2.6
58,140	+				-1.2
58,140	+				-0.3
58,140	+				-0.8
58,140	+				+1.4
58,140	+				+0.1
58,140	+				-0.3
58,140	+				+0.8
58,140	+				+0.5
58,140	+				-0.2
58,141	-				+0.3
58,141	-				-0.2
58,141	-				+0.0
58,141	-				-0.6
58,141	-				-0.8
58,141	-				+1.4
58,141	-				+2.0
58,141	-				-0.3
58,194	+				+1.4
58,194	+				-1.0
58,195	-				+0.0
58,262	+				-1.3
58,262	+				+1.2
58,263	-				-0.1
58,271	+				-1.0
58,271	+				+1.6
58,271	+				+0.8
58,271	+				+1.4
58,271	+				+0.7
58,271	+				+0.4
58,271	+				-0.4
58,272	-				+0.6
58,272	-				+0.5
58,272	-				-0.4
58,275	+				-1.8
58,275	+				+0.9
58,323	+				-2.6
58,323	+				+0.8
58,323	+				+1.0
58,323	+				+2.4
58,324	-				-0.2
58,324	-				+0.0
58,534	+				+2.0
58,535	-				-1.3
58,535	-				+3.0
58,595	-				-0.6
58,595	-				+1.1
58,744	+				+1.3
58,744	+				+0.6
58,744	+				-0.2
58,744	+				-0.1
58,745	-				-1.3
58,745	-				-0.8
58,770	+				-0.6
58,770	+				+0.4
58,786	+				-2.2
58,966	+		Pf1N1B4_5307	0.65	+0.3
58,966	+		Pf1N1B4_5307	0.65	+1.2
58,967	-				-0.6
58,967	-		Pf1N1B4_5307	0.65	-1.0
59,002	+		Pf1N1B4_5307	0.79	-1.3
59,002	+		Pf1N1B4_5307	0.79	-0.9
59,003	-		Pf1N1B4_5307	0.79	-0.2
59,063	+				-0.2