Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4882

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
5,398,722	+		Pf1N1B4_4881	0.25	+0.4
5,398,824	+		Pf1N1B4_4881	0.36	-0.2
5,398,825	-		Pf1N1B4_4881	0.36	-1.8
5,398,847	+				-0.4
5,398,847	+		Pf1N1B4_4881	0.38	+1.8
5,398,982	+		Pf1N1B4_4881	0.53	-0.3
5,398,983	-				+0.4
5,398,983	-		Pf1N1B4_4881	0.53	-2.2
5,399,060	+		Pf1N1B4_4881	0.62	+0.4
5,399,060	+		Pf1N1B4_4881	0.62	-1.5
5,399,060	+		Pf1N1B4_4881	0.62	+0.2
5,399,060	+		Pf1N1B4_4881	0.62	-1.2
5,399,061	-		Pf1N1B4_4881	0.62	+0.1
5,399,097	-		Pf1N1B4_4881	0.66	-0.4
5,399,276	+		Pf1N1B4_4881	0.85	+1.1
5,399,276	+		Pf1N1B4_4881	0.85	+0.4
5,399,276	+		Pf1N1B4_4881	0.85	-0.1
5,399,277	-		Pf1N1B4_4881	0.85	-0.6
5,399,320	+				-0.6
5,399,352	+				-0.6
5,399,352	+				+2.0
5,399,353	-				-0.6
5,399,387	+				-1.2
5,399,387	+				-0.6
5,399,388	-				+0.4
5,399,388	-				-0.6
5,399,411	+				-1.9
5,399,411	+				-1.2
5,399,411	+				-0.8
5,399,416	+				-0.2
5,399,496	+				+0.3
5,399,497	-				+1.0
5,399,630	-				-1.6
5,399,630	-				+2.0
5,399,643	-				+2.0
5,399,643	-				-1.2
5,399,849	+		Pf1N1B4_4882	0.19	-0.6
5,399,849	+		Pf1N1B4_4882	0.19	-3.3
5,399,849	+		Pf1N1B4_4882	0.19	+0.8
5,399,871	+		Pf1N1B4_4882	0.21	-0.9
5,399,872	-		Pf1N1B4_4882	0.21	+0.7
5,399,892	+		Pf1N1B4_4882	0.23	-0.8
5,399,893	-		Pf1N1B4_4882	0.24	-1.2
5,400,125	+		Pf1N1B4_4882	0.49	-1.2
5,400,125	+				+0.4
5,400,126	-		Pf1N1B4_4882	0.49	-0.9
5,400,179	+		Pf1N1B4_4882	0.55	-0.4
5,400,179	+		Pf1N1B4_4882	0.55	-1.9
5,400,180	-				-1.2
5,400,635	-				+2.2
5,400,635	-				+1.8
5,400,781	+				+1.4
5,400,784	+				-1.2
5,400,820	+				-0.4
5,400,820	+				-0.6