Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4750

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
5,246,982	-				-0.9
5,247,072	+				+0.7
5,247,073	-				+0.4
5,247,073	-				+0.2
5,247,073	-				-0.2
5,247,085	+				-0.0
5,247,086	-				+2.4
5,247,086	-				-1.4
5,247,210	+				+0.2
5,247,211	-				-0.0
5,247,320	-				+0.4
5,247,320	-				+0.1
5,247,320	-				-0.6
5,247,320	-				-0.0
5,247,326	+				+1.0
5,247,327	-				+0.6
5,247,334	-				-0.6
5,247,334	-				-1.2
5,247,334	-				-0.2
5,247,363	-				-0.5
5,247,396	-				+0.6
5,247,421	-				+0.4
5,247,421	-				+0.8
5,247,421	-				-0.1
5,247,519	-				+0.1
5,247,519	-				-0.2
5,247,519	-				+0.0
5,247,519	-				-2.4
5,247,519	-				-0.6
5,247,519	-				-0.1
5,247,519	-				-0.1
5,247,519	-				+0.4
5,247,519	-				-0.6
5,247,559	-				-0.4
5,247,559	-				-0.7
5,247,571	-				-0.2
5,247,571	-				-1.5
5,247,571	-				+0.1
5,247,592	-				-0.9
5,247,592	-				+0.4
5,247,592	-				-0.6
5,247,592	-				+1.4
5,247,611	-				+0.6
5,247,611	-				-2.1
5,247,611	-				-1.3
5,247,611	-				-1.2
5,247,668	-				-0.9
5,247,668	-				-1.6
5,247,668	-				-1.6
5,247,668	-				-0.6
5,247,668	-				-0.4
5,247,668	-				-0.6
5,247,668	-				+0.8
5,247,671	+				+0.4
5,247,672	-				-1.8
5,247,672	-				-0.9
5,247,744	-				+1.0
5,247,744	-				+0.4
5,247,747	-				-1.2
5,247,747	-				+0.3
5,247,747	-				-1.6
5,247,747	-				-0.6
5,247,747	-				+0.1
5,247,747	-				-0.2
5,247,747	-				-0.1
5,247,747	-				-0.5
5,247,747	-				-2.4
5,247,779	+				-0.6
5,247,780	-				-0.0
5,247,780	-				+0.4
5,247,780	-				-0.2
5,247,780	-				+0.8
5,247,780	-				+0.4
5,247,780	-				+2.0
5,247,780	-				-1.8
5,247,780	-				-2.8
5,247,780	-				-1.8
5,247,780	-				-2.4
5,247,780	-				-0.0
5,247,780	-				-2.0
5,247,780	-				-0.2
5,247,780	-				-1.6
5,247,783	-				-0.2
5,247,783	-				-2.2
5,247,794	-				-3.4
5,247,800	-				-1.2
5,247,905	-				+0.6
5,247,905	-				+0.4
5,247,920	+				-2.2
5,247,920	+				+0.6
5,247,921	-				-1.2
5,247,921	-				-0.2
5,247,938	+				-0.6
5,247,939	-				-1.2
5,247,973	-				-0.6
5,247,985	-				+2.0
5,248,028	+				-0.0
5,248,029	-				-0.9
5,248,029	-				-0.0
5,248,059	-		Pf1N1B4_4750	0.12	-0.9
5,248,173	-		Pf1N1B4_4750	0.26	-0.6
5,248,382	+		Pf1N1B4_4750	0.51	+1.0
5,248,427	+		Pf1N1B4_4750	0.56	+0.4
5,248,427	+		Pf1N1B4_4750	0.56	+0.4
5,248,427	+		Pf1N1B4_4750	0.56	+0.8
5,248,427	+		Pf1N1B4_4750	0.56	-2.2
5,248,427	+				+3.0
5,248,427	+		Pf1N1B4_4750	0.56	+0.4
5,248,427	+		Pf1N1B4_4750	0.56	+0.4
5,248,427	+		Pf1N1B4_4750	0.56	-1.6
5,248,427	+		Pf1N1B4_4750	0.56	-0.6
5,248,427	+		Pf1N1B4_4750	0.56	-0.8
5,248,427	+		Pf1N1B4_4750	0.56	-0.6
5,248,428	-		Pf1N1B4_4750	0.56	-0.2
5,248,428	-		Pf1N1B4_4750	0.56	+0.2
5,248,428	-		Pf1N1B4_4750	0.56	-1.2
5,248,428	-		Pf1N1B4_4750	0.56	+1.1
5,248,428	-				+1.0
5,248,428	-		Pf1N1B4_4750	0.56	-1.4
5,248,428	-		Pf1N1B4_4750	0.56	-0.4
5,248,428	-		Pf1N1B4_4750	0.56	+1.1
5,248,428	-		Pf1N1B4_4750	0.56	+0.4
5,248,428	-		Pf1N1B4_4750	0.56	-1.6
5,248,430	-		Pf1N1B4_4750	0.56	-0.7
5,248,451	+		Pf1N1B4_4750	0.59	+0.4
5,248,451	+		Pf1N1B4_4750	0.59	-1.8
5,248,451	+		Pf1N1B4_4750	0.59	-0.9
5,248,452	-		Pf1N1B4_4750	0.59	-1.4
5,248,502	+		Pf1N1B4_4750	0.65	-0.0
5,248,503	-		Pf1N1B4_4750	0.65	-0.3
5,248,568	+		Pf1N1B4_4750	0.73	+0.1
5,248,569	-				-1.2
5,248,660	+		Pf1N1B4_4750	0.84	-0.4
5,248,660	+		Pf1N1B4_4750	0.84	-0.3
5,248,661	-		Pf1N1B4_4750	0.84	-0.6
5,248,661	-		Pf1N1B4_4750	0.84	-0.6
5,248,685	+		Pf1N1B4_4750	0.87	-0.1
5,248,686	-		Pf1N1B4_4750	0.87	-1.9
5,248,686	-		Pf1N1B4_4750	0.87	-1.6
5,248,724	-				+0.8
5,248,737	-				-2.1
5,248,739	+				+0.4
5,248,739	+				-0.2
5,248,740	-				-0.4
5,248,860	-				-1.2
5,248,860	-				+1.4
5,248,919	-				-0.6
5,248,936	+				+0.2
5,248,936	+				-1.2
5,248,946	-				-1.9
5,248,946	-				+1.2
5,248,946	-				+0.1
5,249,071	-		Pf1N1B4_4751	0.13	+0.2
5,249,086	-				-1.6
5,249,450	+				+2.7
5,249,451	-		Pf1N1B4_4751	0.57	-0.3
5,249,451	-				-0.2
5,249,483	+		Pf1N1B4_4751	0.61	-2.4
5,249,484	-		Pf1N1B4_4751	0.61	+0.4
5,249,484	-		Pf1N1B4_4751	0.61	-0.6
5,249,487	-		Pf1N1B4_4751	0.62	+0.2
5,249,487	-		Pf1N1B4_4751	0.62	-0.6
5,249,603	+		Pf1N1B4_4751	0.75	+0.8
5,249,604	-				-2.4
5,249,619	-		Pf1N1B4_4751	0.77	-0.0