Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4550
Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,017,403 | - | Pf1N1B4_4549 | 0.23 | -1.1 | |
| 5,017,703 | + | +0.5 | |||
| 5,018,073 | + | Pf1N1B4_4549 | 0.77 | +0.1 | |
| 5,018,074 | - | Pf1N1B4_4549 | 0.78 | +0.8 | |
| 5,018,213 | + | -1.1 | |||
| 5,018,214 | - | +0.5 | |||
| 5,018,355 | - | +0.1 | |||
| 5,018,363 | + | +0.5 | |||
| 5,018,572 | - | Pf1N1B4_4550 | 0.21 | +0.0 | |
| 5,018,657 | - | Pf1N1B4_4550 | 0.28 | +1.0 | |
| 5,018,716 | + | Pf1N1B4_4550 | 0.34 | -0.7 | |
| 5,018,738 | + | Pf1N1B4_4550 | 0.36 | -2.1 | |
| 5,018,739 | - | Pf1N1B4_4550 | 0.36 | -0.3 | |
| 5,018,930 | + | Pf1N1B4_4550 | 0.54 | -2.1 | |
| 5,018,950 | - | -0.5 | |||
| 5,020,076 | + | +1.5 | |||
| 5,020,268 | + | Pf1N1B4_4551 | 0.64 | +0.2 |
Or see this region's nucleotide sequence