Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4352

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,807,024	-				-1.9
4,807,024	-				+0.1
4,807,028	-				+2.6
4,807,445	+		Pf1N1B4_4351	0.40	+1.6
4,807,446	-		Pf1N1B4_4351	0.41	-0.6
4,807,446	-		Pf1N1B4_4351	0.41	-0.7
4,807,452	-		Pf1N1B4_4351	0.41	-0.9
4,807,452	-		Pf1N1B4_4351	0.41	+0.6
4,807,467	-		Pf1N1B4_4351	0.43	+0.1
4,807,467	-		Pf1N1B4_4351	0.43	+0.1
4,807,467	-		Pf1N1B4_4351	0.43	+0.5
4,807,664	+		Pf1N1B4_4351	0.64	-0.2
4,807,665	-		Pf1N1B4_4351	0.64	+0.6
4,807,665	-				+0.6
4,807,745	+		Pf1N1B4_4351	0.73	-1.4
4,807,745	+		Pf1N1B4_4351	0.73	-0.4
4,807,746	-		Pf1N1B4_4351	0.73	-3.0
4,807,746	-		Pf1N1B4_4351	0.73	+1.3
4,807,746	-		Pf1N1B4_4351	0.73	-0.4
4,807,746	-		Pf1N1B4_4351	0.73	+1.7
4,807,773	-		Pf1N1B4_4351	0.76	-0.6
4,807,820	+		Pf1N1B4_4351	0.81	+0.3
4,807,832	+		Pf1N1B4_4351	0.83	+0.1
4,807,841	-				-1.0
4,808,029	+				+0.6
4,808,030	-				+1.3
4,808,177	+		Pf1N1B4_4352	0.17	-0.7
4,808,233	+		Pf1N1B4_4352	0.22	-1.0
4,808,234	-		Pf1N1B4_4352	0.22	-0.1
4,808,234	-		Pf1N1B4_4352	0.22	-1.4
4,808,407	+		Pf1N1B4_4352	0.37	-2.0
4,808,407	+		Pf1N1B4_4352	0.37	-0.2
4,808,408	-		Pf1N1B4_4352	0.37	-0.4
4,808,408	-		Pf1N1B4_4352	0.37	-0.7
4,809,106	+				+3.2
4,809,106	+				-0.0
4,809,106	+				-2.9
4,809,107	-				-0.4
4,809,107	-				-2.8
4,809,176	+				-0.3
4,809,176	+				+0.6
4,809,176	+				+0.9
4,809,281	-				-1.2
4,809,376	+				+1.2
4,809,377	-				-0.0
4,809,400	+				-0.0
4,809,401	-				-1.8
4,809,403	+				+0.6
4,809,403	+				+0.6
4,809,404	-				-0.3
4,809,404	-				-1.0
4,809,455	+				+0.6
4,809,456	-				-1.4
4,809,488	-				+0.6
4,809,538	+				+0.6
4,809,546	+				-0.8