Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3968

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,408,436	+		Pf1N1B4_3967	0.37	-0.8
4,408,895	+				+1.3
4,408,895	+		Pf1N1B4_3967	0.77	+2.7
4,408,895	+		Pf1N1B4_3967	0.77	+0.5
4,408,896	-		Pf1N1B4_3967	0.77	-1.0
4,408,896	-		Pf1N1B4_3967	0.77	+0.2
4,408,997	+		Pf1N1B4_3967	0.86	-0.3
4,409,027	+		Pf1N1B4_3967	0.89	-0.1
4,409,027	+		Pf1N1B4_3967	0.89	-0.1
4,409,118	+				-2.3
4,409,118	+				+1.1
4,409,118	+				-0.8
4,409,118	+				+1.5
4,409,118	+				-1.9
4,409,118	+				+1.5
4,409,119	-				-0.0
4,409,173	+				-0.2
4,409,201	-				-0.5
4,409,201	-				-0.3
4,409,201	-				-0.3
4,409,247	+				+0.4
4,409,247	+				+0.7
4,409,247	+				+2.0
4,409,247	+				-0.4
4,409,247	+				-0.2
4,409,247	+				+1.4
4,409,248	-				+0.3
4,409,515	-		Pf1N1B4_3968	0.13	+2.5
4,409,685	-		Pf1N1B4_3968	0.29	+0.7
4,409,798	+		Pf1N1B4_3968	0.40	+0.1
4,409,799	-		Pf1N1B4_3968	0.40	+1.1
4,410,023	+		Pf1N1B4_3968	0.62	+2.7
4,410,023	+		Pf1N1B4_3968	0.62	+1.1
4,410,024	-		Pf1N1B4_3968	0.62	-1.3
4,410,150	-		Pf1N1B4_3968	0.74	+0.3
4,410,336	-				-0.9
4,410,640	+		Pf1N1B4_3969	0.18	+0.7
4,410,641	-		Pf1N1B4_3969	0.18	-0.3
4,410,820	+		Pf1N1B4_3969	0.34	-0.3
4,410,820	+		Pf1N1B4_3969	0.34	-0.3
4,410,820	+		Pf1N1B4_3969	0.34	+0.7
4,410,821	-				-0.3
4,410,821	-		Pf1N1B4_3969	0.34	+1.0
4,410,821	-		Pf1N1B4_3969	0.34	-0.1
4,410,821	-		Pf1N1B4_3969	0.34	+0.7
4,410,821	-		Pf1N1B4_3969	0.34	+0.1
4,410,821	-		Pf1N1B4_3969	0.34	-1.3
4,410,821	-		Pf1N1B4_3969	0.34	-0.6
4,411,249	+		Pf1N1B4_3969	0.72	-0.2
4,411,420	+		Pf1N1B4_3969	0.88	+1.2
4,411,420	+		Pf1N1B4_3969	0.88	-1.5