Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3831

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,244,028	+		Pf1N1B4_3829	0.45	-0.0
4,244,028	+		Pf1N1B4_3829	0.45	-1.2
4,244,028	+		Pf1N1B4_3829	0.45	-1.6
4,244,028	+		Pf1N1B4_3829	0.45	+0.5
4,244,028	+		Pf1N1B4_3829	0.45	-3.2
4,244,028	+		Pf1N1B4_3829	0.45	-2.1
4,244,028	+		Pf1N1B4_3829	0.45	-1.4
4,244,028	+		Pf1N1B4_3829	0.45	-0.7
4,244,028	+		Pf1N1B4_3829	0.45	-0.7
4,244,028	+		Pf1N1B4_3829	0.45	+0.4
4,244,028	+		Pf1N1B4_3829	0.45	-0.8
4,244,029	-		Pf1N1B4_3829	0.45	-0.3
4,244,029	-		Pf1N1B4_3829	0.45	+1.2
4,244,029	-		Pf1N1B4_3829	0.45	-0.7
4,244,029	-		Pf1N1B4_3829	0.45	-1.2
4,244,029	-		Pf1N1B4_3829	0.45	-0.2
4,244,029	-		Pf1N1B4_3829	0.45	+0.1
4,244,029	-		Pf1N1B4_3829	0.45	-1.3
4,244,029	-		Pf1N1B4_3829	0.45	-0.3
4,244,029	-		Pf1N1B4_3829	0.45	-2.7
4,244,029	-		Pf1N1B4_3829	0.45	-1.1
4,244,029	-		Pf1N1B4_3829	0.45	-2.0
4,244,029	-		Pf1N1B4_3829	0.45	-1.0
4,244,029	-		Pf1N1B4_3829	0.45	-1.3
4,244,029	-		Pf1N1B4_3829	0.45	-1.8
4,244,029	-		Pf1N1B4_3829	0.45	-0.0
4,244,030	+		Pf1N1B4_3829	0.45	+0.7
4,244,030	+		Pf1N1B4_3829	0.45	-0.6
4,244,030	+		Pf1N1B4_3829	0.45	+0.2
4,244,031	-		Pf1N1B4_3829	0.45	-0.8
4,244,031	-		Pf1N1B4_3829	0.45	+0.7
4,244,031	-		Pf1N1B4_3829	0.45	-1.3
4,244,031	-		Pf1N1B4_3829	0.45	-2.6
4,244,031	-		Pf1N1B4_3829	0.45	-1.6
4,244,031	-		Pf1N1B4_3829	0.45	-0.3
4,244,040	+		Pf1N1B4_3829	0.46	-1.3
4,244,040	+		Pf1N1B4_3829	0.46	+1.3
4,244,040	+		Pf1N1B4_3829	0.46	+0.7
4,244,041	-				+1.7
4,244,041	-		Pf1N1B4_3829	0.46	-1.0
4,244,041	-		Pf1N1B4_3829	0.46	-1.8
4,244,041	-		Pf1N1B4_3829	0.46	-0.5
4,244,049	-		Pf1N1B4_3829	0.47	-0.8
4,244,129	+		Pf1N1B4_3829	0.55	-0.6
4,244,129	+		Pf1N1B4_3829	0.55	-1.7
4,244,129	+		Pf1N1B4_3829	0.55	+0.7
4,244,130	-		Pf1N1B4_3829	0.55	-2.1
4,244,130	-		Pf1N1B4_3829	0.55	-0.8
4,244,130	-		Pf1N1B4_3829	0.55	-0.6
4,244,130	-		Pf1N1B4_3829	0.55	-0.5
4,244,130	-		Pf1N1B4_3829	0.55	-1.3
4,244,130	-		Pf1N1B4_3829	0.55	-0.7
4,244,130	-				+0.2
4,244,130	-		Pf1N1B4_3829	0.55	-1.6
4,244,130	-		Pf1N1B4_3829	0.55	+0.2
4,244,130	-		Pf1N1B4_3829	0.55	-1.3
4,244,207	+		Pf1N1B4_3829	0.63	+0.3
4,244,208	-		Pf1N1B4_3829	0.63	-1.3
4,244,230	+				-0.3
4,244,230	+		Pf1N1B4_3829	0.65	-0.6
4,244,231	-		Pf1N1B4_3829	0.66	-1.0
4,244,231	-		Pf1N1B4_3829	0.66	-1.3
4,244,231	-		Pf1N1B4_3829	0.66	-2.0
4,244,231	-		Pf1N1B4_3829	0.66	-1.1
4,244,231	-		Pf1N1B4_3829	0.66	-2.3
4,244,237	-		Pf1N1B4_3829	0.66	-0.8
4,244,392	-		Pf1N1B4_3829	0.82	-1.6
4,244,392	-		Pf1N1B4_3829	0.82	-2.1
4,244,392	-		Pf1N1B4_3829	0.82	-0.0
4,244,392	-		Pf1N1B4_3829	0.82	-1.1
4,244,469	-		Pf1N1B4_3829	0.89	-0.6
4,244,549	-				-0.8
4,244,549	-				-3.7
4,244,620	+				-1.6
4,244,620	+				-1.7
4,244,620	+				+0.0
4,244,621	-				-2.2
4,244,621	-				+1.0
4,244,621	-				-0.3
4,244,621	-				-1.3
4,244,621	-				-1.6
4,244,621	-				-1.1
4,244,621	-				-0.3
4,244,636	+				+0.7
4,244,636	+				-0.8
4,244,636	+				-0.6
4,244,636	+				-1.1
4,244,636	+				+1.5
4,244,637	-				-0.4
4,244,637	-				-2.1
4,244,825	+		Pf1N1B4_3830	0.76	-1.3
4,244,825	+		Pf1N1B4_3830	0.76	-0.8
4,244,849	+		Pf1N1B4_3830	0.85	+0.1
4,244,850	-		Pf1N1B4_3830	0.86	+1.4
4,244,850	-		Pf1N1B4_3830	0.86	+0.5
4,244,850	-		Pf1N1B4_3830	0.86	+0.7
4,244,855	+		Pf1N1B4_3830	0.88	+0.4
4,244,855	+		Pf1N1B4_3830	0.88	-0.3
4,244,873	+				-1.4
4,244,873	+				+0.7
4,244,874	-				-2.7
4,245,124	+		Pf1N1B4_3831	0.29	+1.7
4,245,143	-		Pf1N1B4_3831	0.31	-1.3
4,245,171	+		Pf1N1B4_3831	0.34	-0.6
4,245,171	+		Pf1N1B4_3831	0.34	-0.7
4,245,171	+		Pf1N1B4_3831	0.34	-0.7
4,245,172	-		Pf1N1B4_3831	0.34	-0.8
4,245,242	+		Pf1N1B4_3831	0.43	-1.6
4,245,242	+		Pf1N1B4_3831	0.43	-1.8
4,245,242	+		Pf1N1B4_3831	0.43	-1.4
4,245,242	+		Pf1N1B4_3831	0.43	-0.5
4,245,242	+		Pf1N1B4_3831	0.43	-1.3
4,245,243	-		Pf1N1B4_3831	0.43	-3.4
4,245,256	-		Pf1N1B4_3831	0.45	-0.5
4,245,400	+		Pf1N1B4_3831	0.62	-0.8
4,245,400	+		Pf1N1B4_3831	0.62	-0.5
4,245,400	+		Pf1N1B4_3831	0.62	+0.2
4,245,400	+		Pf1N1B4_3831	0.62	+0.1
4,245,401	-		Pf1N1B4_3831	0.62	-2.6
4,245,548	+		Pf1N1B4_3831	0.80	+0.7
4,245,548	+		Pf1N1B4_3831	0.80	+0.7
4,245,548	+		Pf1N1B4_3831	0.80	-0.5
4,245,548	+		Pf1N1B4_3831	0.80	-0.3
4,245,548	+		Pf1N1B4_3831	0.80	-1.3
4,245,548	+		Pf1N1B4_3831	0.80	+0.2
4,245,548	+		Pf1N1B4_3831	0.80	-0.4
4,245,548	+		Pf1N1B4_3831	0.80	+0.2
4,245,548	+				+1.7
4,245,549	-		Pf1N1B4_3831	0.80	-1.3
4,245,549	-		Pf1N1B4_3831	0.80	-1.4
4,245,563	+		Pf1N1B4_3831	0.82	-1.6
4,245,563	+				-0.3
4,245,563	+		Pf1N1B4_3831	0.82	-0.8
4,245,563	+		Pf1N1B4_3831	0.82	-1.4
4,245,564	-		Pf1N1B4_3831	0.82	-0.8
4,245,564	-				+1.3
4,245,728	+				-0.3
4,245,733	+				+0.7
4,245,733	+				-2.7
4,245,733	+				+0.5
4,245,733	+				-0.3
4,245,733	+				-0.9
4,245,733	+				-1.3
4,245,733	+				+0.3
4,245,733	+				+1.5
4,245,733	+				+0.4
4,245,733	+				+0.1
4,245,733	+				-1.3
4,245,733	+				-0.7
4,245,733	+				-1.8
4,245,804	+				+0.3
4,246,387	+				-1.7
4,246,387	+				-1.4
4,246,387	+				-2.7
4,246,387	+				-2.4
4,246,387	+				-0.7
4,246,387	+				-3.2
4,246,387	+				-1.8
4,246,387	+				+0.0
4,246,387	+				-2.6
4,246,401	+				-2.3
4,246,401	+				-1.1
4,246,401	+				+0.7
4,246,401	+				-2.1
4,246,402	-				-2.4
4,246,408	+				-0.5
4,246,408	+				-2.0
4,246,408	+				-2.5
4,246,408	+				-2.1
4,246,408	+				-1.5
4,246,408	+				-0.7
4,246,408	+				-2.1
4,246,408	+				-0.7
4,246,408	+				-1.8
4,246,409	-				-2.1
4,246,414	+				-1.6
4,246,414	+				-2.9
4,246,674	+		Pf1N1B4_3833	0.17	-1.6