Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3817

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,227,792	+		Pf1N1B4_3816	0.41	-1.4
4,227,793	-		Pf1N1B4_3816	0.41	-1.6
4,227,801	+		Pf1N1B4_3816	0.41	+0.2
4,227,993	+		Pf1N1B4_3816	0.54	-2.3
4,227,994	-		Pf1N1B4_3816	0.54	-2.3
4,228,106	+				-0.8
4,228,107	-		Pf1N1B4_3816	0.61	-0.3
4,228,107	-		Pf1N1B4_3816	0.61	-2.5
4,228,372	-		Pf1N1B4_3816	0.78	-0.1
4,228,453	-		Pf1N1B4_3816	0.84	-3.2
4,228,453	-		Pf1N1B4_3816	0.84	-0.8
4,228,488	+		Pf1N1B4_3816	0.86	-1.3
4,228,489	-		Pf1N1B4_3816	0.86	-0.5
4,228,508	+		Pf1N1B4_3816	0.87	-2.3
4,228,629	+				-0.8
4,228,709	+				-2.1
4,228,709	+				-1.4
4,228,709	+				-2.2
4,228,709	+				+0.0
4,228,710	-				-1.1
4,228,710	-				+0.7
4,228,710	-				-1.6
4,228,710	-				-0.3
4,228,719	+				-0.3
4,228,720	-				-0.3
4,228,757	+				-0.8
4,228,757	+				-2.3
4,228,757	+				+1.1
4,228,758	-				-1.6
4,228,758	-				+0.4
4,228,761	+				-1.8
4,228,761	+				-0.3
4,228,761	+				-1.3
4,228,762	-		Pf1N1B4_3817	0.10	+1.1
4,228,762	-		Pf1N1B4_3817	0.10	-1.6
4,228,867	+		Pf1N1B4_3817	0.30	-1.6
4,228,887	+		Pf1N1B4_3817	0.33	-0.3
4,228,916	+		Pf1N1B4_3817	0.39	-2.5
4,228,940	+		Pf1N1B4_3817	0.43	-1.7
4,228,940	+		Pf1N1B4_3817	0.43	-1.6
4,228,941	-		Pf1N1B4_3817	0.43	-2.1
4,229,024	+		Pf1N1B4_3817	0.59	-2.8
4,229,024	+		Pf1N1B4_3817	0.59	-2.1
4,229,024	+		Pf1N1B4_3817	0.59	-1.8
4,229,150	+		Pf1N1B4_3817	0.82	-0.3
4,229,165	+		Pf1N1B4_3817	0.85	-1.7
4,229,165	+		Pf1N1B4_3817	0.85	-3.3
4,229,244	+				-0.3
4,229,244	+				-1.0
4,229,244	+				-1.3
4,229,244	+				-0.8
4,229,311	+				-1.6
4,229,311	+				+0.7
4,229,311	+				-3.3
4,229,311	+				+0.4
4,229,317	+				-1.4
4,229,318	-				+0.9
4,229,371	+				-1.8
4,229,371	+				-1.3
4,229,371	+				-1.6
4,229,371	+				-0.7
4,229,371	+				-3.6
4,229,371	+				-0.4
4,229,385	+				+0.7
4,229,410	+				-0.8
4,229,412	+				-0.8
4,229,412	+				+0.9
4,229,412	+				-0.3
4,229,499	+				-1.5
4,229,542	+				-1.6
4,229,691	-		Pf1N1B4_3818	0.20	-0.3
4,229,816	+		Pf1N1B4_3818	0.38	-0.3
4,229,954	+				-1.6
4,229,954	+		Pf1N1B4_3818	0.57	+0.2
4,230,062	+		Pf1N1B4_3818	0.72	+0.4
4,230,062	+		Pf1N1B4_3818	0.72	-0.7
4,230,062	+		Pf1N1B4_3818	0.72	-1.6
4,230,063	-		Pf1N1B4_3818	0.72	-0.6
4,230,218	+				+1.7
4,230,218	+				-2.2