Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3815

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,225,375	+		Pf1N1B4_3814	0.57	+0.5
4,225,376	-		Pf1N1B4_3814	0.57	+1.2
4,225,458	+		Pf1N1B4_3814	0.63	+1.6
4,225,458	+		Pf1N1B4_3814	0.63	-0.6
4,225,582	+		Pf1N1B4_3814	0.72	+0.8
4,225,582	+		Pf1N1B4_3814	0.72	-0.0
4,225,582	+		Pf1N1B4_3814	0.72	-1.6
4,225,663	+		Pf1N1B4_3814	0.78	+0.0
4,225,663	+		Pf1N1B4_3814	0.78	-1.4
4,225,663	+		Pf1N1B4_3814	0.78	-1.6
4,225,664	-				-0.2
4,225,664	-		Pf1N1B4_3814	0.78	-0.3
4,225,664	-		Pf1N1B4_3814	0.78	-0.1
4,225,664	-		Pf1N1B4_3814	0.78	+0.3
4,225,664	-		Pf1N1B4_3814	0.78	-1.8
4,225,664	-				-0.2
4,225,664	-				-0.2
4,225,826	-				-0.4
4,225,901	-				+1.8
4,225,992	+				+0.5
4,225,992	+				+0.3
4,225,992	+				-0.6
4,225,992	+				-0.1
4,226,015	+				+0.0
4,226,015	+				-0.5
4,226,016	-				+1.2
4,226,036	+				-0.6
4,226,036	+				+0.0
4,226,037	-				-1.8
4,226,174	+				+1.8
4,226,202	-				+0.8
4,226,413	+		Pf1N1B4_3815	0.24	-0.2
4,226,414	-		Pf1N1B4_3815	0.24	-2.2
4,226,414	-		Pf1N1B4_3815	0.24	-0.2
4,226,414	-		Pf1N1B4_3815	0.24	-1.1
4,226,414	-		Pf1N1B4_3815	0.24	-1.2
4,226,434	+		Pf1N1B4_3815	0.26	+0.8
4,226,435	-		Pf1N1B4_3815	0.26	-1.6
4,226,435	-		Pf1N1B4_3815	0.26	-1.2
4,226,435	-		Pf1N1B4_3815	0.26	+1.3
4,226,435	-		Pf1N1B4_3815	0.26	-0.8
4,226,435	-		Pf1N1B4_3815	0.26	+0.4
4,226,435	-		Pf1N1B4_3815	0.26	+0.8
4,226,698	+		Pf1N1B4_3815	0.52	-1.8
4,226,699	-		Pf1N1B4_3815	0.52	-0.8
4,226,699	-		Pf1N1B4_3815	0.52	-0.8
4,226,699	-		Pf1N1B4_3815	0.52	-1.2
4,226,699	-		Pf1N1B4_3815	0.52	-0.6
4,226,699	-		Pf1N1B4_3815	0.52	+0.8
4,226,699	-		Pf1N1B4_3815	0.52	-0.8
4,226,776	+		Pf1N1B4_3815	0.60	-0.2
4,226,776	+				+0.8
4,227,079	+				+1.2
4,227,079	+				-2.1
4,227,080	-				-1.9
4,227,080	-				-2.2
4,227,080	-				-0.6
4,227,080	-				-0.8
4,227,091	+				-0.2
4,227,091	+				-2.2
4,227,091	+				-1.8
4,227,091	+				-1.2
4,227,091	+				-0.2
4,227,092	-				-1.5
4,227,092	-				-2.4
4,227,092	-				-1.6
4,227,092	-				-1.8
4,227,092	-				-0.8
4,227,297	+				-0.8
4,227,297	+				-1.6
4,227,297	+				-1.6
4,227,297	+				-2.2
4,227,297	+				-2.2
4,227,298	-				-1.8
4,227,298	-				-2.4
4,227,576	+		Pf1N1B4_3816	0.27	+0.7
4,227,576	+				+0.7
4,227,576	+		Pf1N1B4_3816	0.27	+0.7
4,227,576	+		Pf1N1B4_3816	0.27	-1.1
4,227,576	+		Pf1N1B4_3816	0.27	-0.5
4,227,577	-		Pf1N1B4_3816	0.27	-1.8
4,227,577	-		Pf1N1B4_3816	0.27	-0.8
4,227,577	-				-0.3
4,227,577	-				-1.3
4,227,577	-				-1.3
4,227,613	+		Pf1N1B4_3816	0.29	-0.7
4,227,613	+				-1.6
4,227,613	+		Pf1N1B4_3816	0.29	-0.8
4,227,614	-		Pf1N1B4_3816	0.29	-0.1
4,227,614	-		Pf1N1B4_3816	0.29	-1.3
4,227,614	-		Pf1N1B4_3816	0.29	-0.3
4,227,614	-		Pf1N1B4_3816	0.29	-0.8
4,227,614	-		Pf1N1B4_3816	0.29	-1.8
4,227,617	+		Pf1N1B4_3816	0.29	-0.7
4,227,617	+		Pf1N1B4_3816	0.29	-1.1
4,227,617	+		Pf1N1B4_3816	0.29	-1.8
4,227,617	+		Pf1N1B4_3816	0.29	-2.3
4,227,617	+		Pf1N1B4_3816	0.29	-0.7
4,227,792	+		Pf1N1B4_3816	0.41	-1.4
4,227,793	-		Pf1N1B4_3816	0.41	-1.6
4,227,801	+		Pf1N1B4_3816	0.41	+0.2
4,227,993	+		Pf1N1B4_3816	0.54	-2.3
4,227,994	-		Pf1N1B4_3816	0.54	-2.3
4,228,106	+				-0.8
4,228,107	-		Pf1N1B4_3816	0.61	-0.3
4,228,107	-		Pf1N1B4_3816	0.61	-2.5