Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3764

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,174,282	+		Pf1N1B4_3762	0.77	+0.2
4,174,282	+		Pf1N1B4_3762	0.77	+0.7
4,174,327	+		Pf1N1B4_3762	0.81	-0.4
4,174,328	-		Pf1N1B4_3762	0.81	-1.1
4,174,328	-		Pf1N1B4_3762	0.81	+0.1
4,174,328	-		Pf1N1B4_3762	0.81	+0.5
4,174,399	+				-0.2
4,174,400	-		Pf1N1B4_3762	0.87	-0.2
4,174,490	-				-0.4
4,174,630	-				+0.4
4,174,630	-				-1.2
4,174,630	-				+1.3
4,174,687	+		Pf1N1B4_3763	0.12	+0.3
4,174,688	-		Pf1N1B4_3763	0.12	+1.2
4,174,773	+		Pf1N1B4_3763	0.29	+0.5
4,174,773	+		Pf1N1B4_3763	0.29	+0.2
4,174,773	+		Pf1N1B4_3763	0.29	-2.8
4,174,773	+		Pf1N1B4_3763	0.29	+0.4
4,174,774	-		Pf1N1B4_3763	0.29	-1.2
4,174,774	-		Pf1N1B4_3763	0.29	-0.8
4,174,774	-		Pf1N1B4_3763	0.29	+0.0
4,174,774	-		Pf1N1B4_3763	0.29	-1.0
4,174,774	-		Pf1N1B4_3763	0.29	+1.5
4,174,774	-		Pf1N1B4_3763	0.29	-2.0
4,174,777	+		Pf1N1B4_3763	0.30	-1.2
4,174,777	+		Pf1N1B4_3763	0.30	-1.5
4,174,777	+		Pf1N1B4_3763	0.30	+1.0
4,174,777	+		Pf1N1B4_3763	0.30	+0.8
4,174,778	-		Pf1N1B4_3763	0.30	+0.5
4,174,778	-		Pf1N1B4_3763	0.30	-0.8
4,174,778	-		Pf1N1B4_3763	0.30	-0.1
4,174,778	-		Pf1N1B4_3763	0.30	+0.1
4,175,188	+				+0.8
4,175,253	+				+0.8
4,175,253	+				+0.8
4,175,253	+				+0.8
4,175,253	+				-0.8
4,175,254	-				+0.2
4,175,254	-				+0.1
4,175,257	+				+0.2
4,175,258	-				+1.1
4,175,362	+		Pf1N1B4_3764	0.11	-0.4
4,175,363	-		Pf1N1B4_3764	0.11	-2.2
4,175,363	-		Pf1N1B4_3764	0.11	+0.0
4,175,363	-		Pf1N1B4_3764	0.11	-1.0
4,175,363	-		Pf1N1B4_3764	0.11	-1.5
4,175,363	-		Pf1N1B4_3764	0.11	-3.0
4,175,488	-		Pf1N1B4_3764	0.24	-0.2
4,175,579	-				-0.2
4,175,845	-		Pf1N1B4_3764	0.60	-0.0
4,176,237	+				+1.3
4,176,237	+				-1.5
4,176,264	+				-0.8
4,176,265	-				+1.8
4,176,268	+				-0.6
4,176,268	+				+0.5
4,176,268	+				+1.3
4,176,268	+				-0.4
4,176,269	-				-1.2
4,176,339	+				-0.4
4,176,339	+				-0.5
4,176,340	-				+0.6
4,176,466	-		Pf1N1B4_3765	0.25	-2.5
4,176,502	+		Pf1N1B4_3765	0.32	+0.8
4,176,503	-		Pf1N1B4_3765	0.32	+0.8
4,176,503	-		Pf1N1B4_3765	0.32	+0.0
4,176,503	-				+0.8
4,176,778	+		Pf1N1B4_3765	0.86	-0.5
4,176,778	+		Pf1N1B4_3765	0.86	+0.8
4,176,778	+		Pf1N1B4_3765	0.86	+0.1
4,176,778	+		Pf1N1B4_3765	0.86	+1.1
4,176,778	+		Pf1N1B4_3765	0.86	+0.2
4,176,778	+		Pf1N1B4_3765	0.86	-0.0
4,176,778	+		Pf1N1B4_3765	0.86	-0.4
4,176,778	+		Pf1N1B4_3765	0.86	+0.8
4,176,778	+		Pf1N1B4_3765	0.86	+0.2
4,176,779	-		Pf1N1B4_3765	0.86	-1.0
4,176,779	-		Pf1N1B4_3765	0.86	-0.4
4,176,779	-		Pf1N1B4_3765	0.86	+0.1
4,176,779	-		Pf1N1B4_3765	0.86	+1.1
4,176,779	-		Pf1N1B4_3765	0.86	-1.2
4,176,937	+				+0.2
4,177,044	+		Pf1N1B4_3766	0.21	-0.2
4,177,044	+		Pf1N1B4_3766	0.21	-0.4
4,177,045	-		Pf1N1B4_3766	0.21	+0.5
4,177,144	-				+0.5
4,177,209	+		Pf1N1B4_3766	0.39	-0.4
4,177,209	+		Pf1N1B4_3766	0.39	+1.0
4,177,209	+		Pf1N1B4_3766	0.39	+0.2
4,177,210	-		Pf1N1B4_3766	0.39	+0.4
4,177,210	-		Pf1N1B4_3766	0.39	+2.8