Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3749

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,159,816	+		Pf1N1B4_3748	0.49	+1.1
4,159,869	-		Pf1N1B4_3748	0.54	-0.2
4,159,958	+		Pf1N1B4_3748	0.62	-0.5
4,159,958	+		Pf1N1B4_3748	0.62	-1.3
4,160,025	+		Pf1N1B4_3748	0.69	-1.8
4,160,025	+		Pf1N1B4_3748	0.69	+1.2
4,160,025	+		Pf1N1B4_3748	0.69	-0.5
4,160,025	+		Pf1N1B4_3748	0.69	-2.0
4,160,026	-		Pf1N1B4_3748	0.69	-1.5
4,160,026	-		Pf1N1B4_3748	0.69	-2.1
4,160,027	+				-1.5
4,160,028	+		Pf1N1B4_3748	0.69	-0.8
4,160,174	+				+0.4
4,160,175	-		Pf1N1B4_3748	0.83	+0.8
4,160,175	-		Pf1N1B4_3748	0.83	-0.5
4,160,420	+				-0.7
4,160,421	-				-0.8
4,160,421	-				+0.3
4,160,540	+				-0.8
4,160,540	+				-0.1
4,160,540	+				-0.4
4,160,613	+				+0.2
4,160,613	+				+1.5
4,160,614	-				+1.2
4,160,614	-				+0.0
4,160,614	-				+0.2
4,160,624	+				+0.1
4,160,625	-				+0.1
4,160,697	+				+0.1
4,160,863	+		Pf1N1B4_3749	0.22	+2.4
4,160,940	+		Pf1N1B4_3749	0.32	+0.8
4,160,940	+		Pf1N1B4_3749	0.32	+0.6
4,161,129	+		Pf1N1B4_3749	0.59	+0.8
4,161,129	+		Pf1N1B4_3749	0.59	+0.3
4,161,129	+		Pf1N1B4_3749	0.59	-1.5
4,161,129	+		Pf1N1B4_3749	0.59	+0.4
4,161,129	+		Pf1N1B4_3749	0.59	+1.0
4,161,129	+		Pf1N1B4_3749	0.59	-1.8
4,161,129	+		Pf1N1B4_3749	0.59	-0.4
4,161,129	+		Pf1N1B4_3749	0.59	+0.8
4,161,130	-		Pf1N1B4_3749	0.59	+0.2
4,161,130	-		Pf1N1B4_3749	0.59	+1.8
4,161,130	-		Pf1N1B4_3749	0.59	+0.9
4,161,130	-		Pf1N1B4_3749	0.59	+0.0
4,161,130	-		Pf1N1B4_3749	0.59	+1.8
4,161,141	+		Pf1N1B4_3749	0.61	+1.1
4,161,141	+		Pf1N1B4_3749	0.61	-2.2
4,161,207	+		Pf1N1B4_3749	0.70	-0.7
4,161,207	+		Pf1N1B4_3749	0.70	+1.4
4,161,208	-		Pf1N1B4_3749	0.70	-1.4
4,161,208	-		Pf1N1B4_3749	0.70	-0.8
4,161,208	-		Pf1N1B4_3749	0.70	+0.8
4,161,208	-				-0.8
4,161,339	+		Pf1N1B4_3749	0.88	+0.0
4,161,528	+				+1.1
4,161,528	+				+0.8
4,161,528	+				-0.8
4,161,528	+				+0.2
4,161,528	+				+0.2
4,161,528	+				+0.8
4,161,528	+				+1.0
4,161,528	+				-1.4
4,161,528	+				+0.5
4,161,529	-				+0.5
4,161,529	-				-0.8
4,161,529	-				+1.5
4,161,529	-				+3.6
4,161,573	-				+0.2
4,161,585	-				-1.5
4,161,585	-				-0.2
4,161,656	-				+0.1
4,162,031	+		Pf1N1B4_3750	0.21	+0.1