Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3702
Experiment: Nalidixic 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,110,896 | - | +1.7 | |||
4,110,976 | + | +1.4 | |||
4,110,977 | - | +1.7 | |||
4,111,000 | + | +1.3 | |||
4,111,000 | + | -1.2 | |||
4,111,000 | + | +0.1 | |||
4,111,635 | + | Pf1N1B4_3702 | 0.85 | +2.1 | |
4,111,719 | + | +0.1 | |||
4,111,734 | + | +0.8 | |||
4,111,746 | - | +1.7 | |||
4,111,753 | + | +1.1 | |||
4,111,915 | + | +0.4 | |||
4,111,916 | - | +0.1 | |||
4,112,280 | + | Pf1N1B4_3703 | 0.73 | +0.8 | |
4,112,280 | + | Pf1N1B4_3703 | 0.73 | +0.8 | |
4,112,280 | + | Pf1N1B4_3703 | 0.73 | +0.2 | |
4,112,280 | + | +0.2 | |||
4,112,280 | + | Pf1N1B4_3703 | 0.73 | +2.2 | |
4,112,280 | + | Pf1N1B4_3703 | 0.73 | +2.2 | |
4,112,281 | - | Pf1N1B4_3703 | 0.73 | +0.4 | |
4,112,281 | - | +0.8 | |||
4,112,281 | - | Pf1N1B4_3703 | 0.73 | -0.0 | |
4,112,356 | - | Pf1N1B4_3703 | 0.87 | +2.4 | |
4,112,356 | - | Pf1N1B4_3703 | 0.87 | +0.2 | |
4,112,370 | + | +0.6 | |||
4,112,414 | + | -0.8 | |||
4,112,414 | + | +0.8 | |||
4,112,414 | + | -0.2 | |||
4,112,522 | + | -0.8 | |||
4,112,589 | + | -0.2 | |||
4,112,589 | + | +0.2 | |||
4,112,590 | - | +1.8 | |||
4,112,590 | - | -0.2 |
Or see this region's nucleotide sequence