Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3449

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,843,680	+				+0.3
3,843,680	+		Pf1N1B4_3448	0.17	+0.9
3,843,681	-		Pf1N1B4_3448	0.18	-0.1
3,843,681	-				-0.1
3,843,832	+		Pf1N1B4_3448	0.47	+0.7
3,843,832	+		Pf1N1B4_3448	0.47	-0.3
3,843,833	-		Pf1N1B4_3448	0.47	-0.4
3,843,833	-		Pf1N1B4_3448	0.47	+1.2
3,843,833	-		Pf1N1B4_3448	0.47	+0.6
3,843,833	-		Pf1N1B4_3448	0.47	+2.2
3,844,154	-				-0.1
3,844,159	+				+1.6
3,844,194	+				-0.1
3,844,194	+				+1.9
3,844,196	+				-0.5
3,844,196	+				-0.4
3,844,196	+				-0.3
3,844,239	+				+0.7
3,844,240	-				-1.1
3,844,240	-				-0.3
3,844,240	-				+1.9
3,844,240	-				-0.1
3,844,327	+				-0.7
3,844,417	+				-0.4
3,844,418	-				-1.4
3,844,424	+				-0.0
3,844,424	+				-1.4
3,844,424	+				+0.9
3,844,424	+				-1.4
3,844,425	-				+0.7
3,844,507	+				-0.7
3,844,507	+				+1.1
3,844,507	+				-1.1
3,844,507	+				-1.4
3,844,507	+				-0.7
3,844,507	+				-0.9
3,844,507	+				-0.1
3,844,508	-				-0.4
3,844,606	+				-1.7
3,844,627	+				+0.9
3,844,628	-				-1.1
3,844,767	+				+1.8
3,844,768	-				-0.7
3,844,768	-				-0.7
3,844,768	-				+0.1
3,844,768	-				-0.1
3,844,905	+		Pf1N1B4_3449	0.23	-0.1
3,844,905	+		Pf1N1B4_3449	0.23	-0.8
3,844,905	+		Pf1N1B4_3449	0.23	+0.1
3,844,905	+		Pf1N1B4_3449	0.23	+2.3
3,844,905	+		Pf1N1B4_3449	0.23	-0.3
3,844,906	-		Pf1N1B4_3449	0.23	+1.6
3,844,906	-		Pf1N1B4_3449	0.23	-0.1
3,844,906	-		Pf1N1B4_3449	0.23	+3.7
3,844,906	-		Pf1N1B4_3449	0.23	-1.1
3,844,906	-		Pf1N1B4_3449	0.23	-0.4
3,844,906	-		Pf1N1B4_3449	0.23	-0.1
3,844,906	-		Pf1N1B4_3449	0.23	-0.6
3,844,932	+		Pf1N1B4_3449	0.26	+0.6
3,844,932	+		Pf1N1B4_3449	0.26	+1.0
3,844,932	+				+1.9
3,844,932	+		Pf1N1B4_3449	0.26	-0.4
3,844,932	+		Pf1N1B4_3449	0.26	+1.3
3,844,932	+		Pf1N1B4_3449	0.26	+0.9
3,844,932	+		Pf1N1B4_3449	0.26	+1.3
3,844,933	-		Pf1N1B4_3449	0.26	+0.6
3,844,933	-		Pf1N1B4_3449	0.26	+1.9
3,844,933	-				+0.3
3,844,933	-		Pf1N1B4_3449	0.26	-0.9
3,844,933	-		Pf1N1B4_3449	0.26	+1.6
3,844,933	-		Pf1N1B4_3449	0.26	-0.1
3,844,933	-		Pf1N1B4_3449	0.26	+1.3
3,844,933	-		Pf1N1B4_3449	0.26	-0.7
3,844,933	-		Pf1N1B4_3449	0.26	-1.1
3,844,933	-		Pf1N1B4_3449	0.26	-0.1
3,844,933	-		Pf1N1B4_3449	0.26	-0.8
3,844,933	-		Pf1N1B4_3449	0.26	-1.4
3,844,934	+		Pf1N1B4_3449	0.26	+0.3
3,844,934	+		Pf1N1B4_3449	0.26	+0.2
3,844,934	+		Pf1N1B4_3449	0.26	+0.1
3,844,934	+		Pf1N1B4_3449	0.26	+0.5
3,844,934	+		Pf1N1B4_3449	0.26	+0.3
3,844,934	+		Pf1N1B4_3449	0.26	+0.4
3,844,934	+		Pf1N1B4_3449	0.26	-1.4
3,844,935	-		Pf1N1B4_3449	0.26	+0.2
3,844,935	-		Pf1N1B4_3449	0.26	+1.3
3,844,935	-		Pf1N1B4_3449	0.26	-0.5
3,844,935	-		Pf1N1B4_3449	0.26	-0.1
3,844,935	-		Pf1N1B4_3449	0.26	+2.2
3,844,935	-		Pf1N1B4_3449	0.26	-0.5
3,844,935	-		Pf1N1B4_3449	0.26	-0.3
3,844,939	-				-0.7
3,844,939	-		Pf1N1B4_3449	0.26	+0.3
3,844,939	-		Pf1N1B4_3449	0.26	+0.4
3,844,939	-		Pf1N1B4_3449	0.26	+0.2
3,844,939	-		Pf1N1B4_3449	0.26	+0.0
3,844,939	-		Pf1N1B4_3449	0.26	+0.8
3,844,939	-		Pf1N1B4_3449	0.26	-1.3
3,844,939	-		Pf1N1B4_3449	0.26	-0.1
3,845,122	-		Pf1N1B4_3449	0.45	+1.1
3,845,122	-		Pf1N1B4_3449	0.45	+0.2
3,845,190	+		Pf1N1B4_3449	0.51	+0.7
3,845,190	+		Pf1N1B4_3449	0.51	+0.1
3,845,191	-		Pf1N1B4_3449	0.51	+0.0
3,845,191	-		Pf1N1B4_3449	0.51	+2.5
3,845,397	+		Pf1N1B4_3449	0.72	+0.9
3,845,398	-		Pf1N1B4_3449	0.72	+0.6
3,845,398	-		Pf1N1B4_3449	0.72	+3.2
3,845,514	+		Pf1N1B4_3449	0.84	-0.3
3,845,514	+		Pf1N1B4_3449	0.84	+1.1
3,845,514	+		Pf1N1B4_3449	0.84	+0.5
3,845,514	+		Pf1N1B4_3449	0.84	+0.5
3,845,515	-		Pf1N1B4_3449	0.84	-0.4
3,845,515	-		Pf1N1B4_3449	0.84	-1.7
3,845,515	-		Pf1N1B4_3449	0.84	+0.4
3,845,515	-		Pf1N1B4_3449	0.84	-0.1
3,845,515	-		Pf1N1B4_3449	0.84	-1.4
3,845,515	-				-0.7
3,845,515	-		Pf1N1B4_3449	0.84	-0.2
3,845,707	+				+0.2
3,845,725	+				+1.9
3,845,725	+				-0.7
3,845,725	+				+0.9
3,845,725	+				-1.4
3,845,725	+				-2.4
3,845,725	+				+1.4
3,845,729	+				-0.3
3,845,729	+				-0.7
3,845,729	+				-0.1
3,845,729	+				+1.1
3,845,729	+				-1.9
3,845,745	+				-1.0
3,845,745	+				+0.3
3,845,747	+				-2.6
3,845,747	+				-0.3
3,845,747	+				-1.1
3,845,747	+				-1.9
3,845,747	+				-1.9
3,845,747	+				-0.1
3,845,747	+				-1.1