Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3347

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,733,915	-		Pf1N1B4_3345	0.52	+0.5
3,733,915	-		Pf1N1B4_3345	0.52	+0.9
3,733,923	+		Pf1N1B4_3345	0.53	-0.3
3,733,924	-		Pf1N1B4_3345	0.53	+0.1
3,733,973	-		Pf1N1B4_3345	0.57	+0.8
3,734,107	+		Pf1N1B4_3345	0.69	+0.2
3,734,107	+		Pf1N1B4_3345	0.69	-1.3
3,734,107	+		Pf1N1B4_3345	0.69	-1.4
3,734,107	+		Pf1N1B4_3345	0.69	+0.7
3,734,108	-		Pf1N1B4_3345	0.69	+2.1
3,734,108	-		Pf1N1B4_3345	0.69	+0.1
3,734,108	-		Pf1N1B4_3345	0.69	-1.4
3,734,108	-		Pf1N1B4_3345	0.69	-0.4
3,734,108	-		Pf1N1B4_3345	0.69	+1.2
3,734,462	-				-0.1
3,734,462	-				+0.4
3,734,462	-				-0.1
3,734,462	-				+0.4
3,734,462	-				+0.8
3,734,475	-				+0.3
3,734,475	-				-1.1
3,734,475	-				+1.1
3,734,502	-		Pf1N1B4_3346	0.17	+1.1
3,734,502	-		Pf1N1B4_3346	0.17	+0.0
3,734,502	-		Pf1N1B4_3346	0.17	+0.9
3,734,502	-		Pf1N1B4_3346	0.17	-0.5
3,734,502	-		Pf1N1B4_3346	0.17	-0.1
3,734,502	-		Pf1N1B4_3346	0.17	-1.1
3,734,507	+		Pf1N1B4_3346	0.18	-0.4
3,734,507	+		Pf1N1B4_3346	0.18	-0.1
3,734,507	+		Pf1N1B4_3346	0.18	-1.8
3,734,508	-		Pf1N1B4_3346	0.19	-1.9
3,734,508	-		Pf1N1B4_3346	0.19	-0.7
3,734,508	-		Pf1N1B4_3346	0.19	+0.9
3,734,508	-		Pf1N1B4_3346	0.19	+0.6
3,734,508	-		Pf1N1B4_3346	0.19	+0.7
3,734,508	-		Pf1N1B4_3346	0.19	+1.1
3,734,508	-		Pf1N1B4_3346	0.19	+0.3
3,734,508	-		Pf1N1B4_3346	0.19	-1.9
3,734,508	-		Pf1N1B4_3346	0.19	+0.5
3,734,508	-		Pf1N1B4_3346	0.19	+0.5
3,734,508	-		Pf1N1B4_3346	0.19	-1.1
3,734,697	-		Pf1N1B4_3346	0.83	+0.2
3,734,697	-		Pf1N1B4_3346	0.83	-0.5
3,734,745	-				-0.1
3,734,822	+				+0.2
3,734,903	+				-0.1
3,734,903	+				-1.2
3,734,904	-				+0.9
3,734,904	-				-0.7
3,734,943	+				+0.9
3,735,164	+		Pf1N1B4_3347	0.32	+0.4
3,735,164	+		Pf1N1B4_3347	0.32	+0.3
3,735,164	+		Pf1N1B4_3347	0.32	+0.9
3,735,164	+				-1.1
3,735,165	-		Pf1N1B4_3347	0.32	+1.1
3,735,165	-		Pf1N1B4_3347	0.32	+1.9
3,735,168	+		Pf1N1B4_3347	0.32	+0.9
3,735,168	+		Pf1N1B4_3347	0.32	+1.5
3,735,169	-				+2.9
3,735,169	-		Pf1N1B4_3347	0.32	+0.2
3,735,176	+				-0.1
3,735,176	+		Pf1N1B4_3347	0.33	-0.1
3,735,176	+		Pf1N1B4_3347	0.33	-0.4
3,735,176	+		Pf1N1B4_3347	0.33	+0.3
3,735,176	+		Pf1N1B4_3347	0.33	+0.9
3,735,176	+		Pf1N1B4_3347	0.33	+1.8
3,735,176	+		Pf1N1B4_3347	0.33	+0.5
3,735,176	+		Pf1N1B4_3347	0.33	-1.2
3,735,176	+		Pf1N1B4_3347	0.33	-0.7
3,735,176	+		Pf1N1B4_3347	0.33	+2.5
3,735,176	+		Pf1N1B4_3347	0.33	+1.2
3,735,177	-		Pf1N1B4_3347	0.33	+0.9
3,735,177	-		Pf1N1B4_3347	0.33	-1.4
3,735,177	-				+2.5
3,735,177	-		Pf1N1B4_3347	0.33	+1.1
3,735,177	-		Pf1N1B4_3347	0.33	-0.7
3,735,177	-		Pf1N1B4_3347	0.33	+0.9
3,735,177	-		Pf1N1B4_3347	0.33	-0.4
3,735,177	-		Pf1N1B4_3347	0.33	-0.1
3,735,177	-		Pf1N1B4_3347	0.33	+0.6
3,735,177	-				+0.9
3,735,177	-		Pf1N1B4_3347	0.33	-0.1
3,735,177	-		Pf1N1B4_3347	0.33	+0.9
3,735,177	-		Pf1N1B4_3347	0.33	-0.8
3,735,183	+		Pf1N1B4_3347	0.34	-0.0
3,735,184	-		Pf1N1B4_3347	0.34	+0.1
3,735,348	-		Pf1N1B4_3347	0.52	+2.5
3,735,437	+		Pf1N1B4_3347	0.61	+1.2
3,735,437	+		Pf1N1B4_3347	0.61	-0.3
3,735,438	-		Pf1N1B4_3347	0.61	+1.1
3,735,438	-		Pf1N1B4_3347	0.61	-0.8
3,735,482	+		Pf1N1B4_3347	0.66	+0.7
3,736,302	+		Pf1N1B4_3348	0.71	+0.3
3,736,329	+		Pf1N1B4_3348	0.75	+0.1
3,736,329	+		Pf1N1B4_3348	0.75	+0.1
3,736,447	-				+1.7
3,736,465	+				-0.1
3,736,489	-				+0.9
3,736,564	+				-1.4
3,736,564	+				-0.7
3,736,633	+				-1.9
3,736,633	+				+0.9
3,736,633	+				+0.2
3,736,634	-				+0.9
3,736,634	-				-1.4
3,736,634	-				-0.7
3,736,634	-				-0.9
3,736,646	+				+0.4
3,736,646	+				+1.3
3,736,648	+				+0.2
3,736,648	+				-0.1
3,736,648	+				-0.7
3,736,649	-				+1.3
3,736,649	-				-1.4
3,736,649	-				-1.2
3,736,649	-				+0.4
3,736,649	-				+0.5
3,736,706	+				-1.3
3,736,709	+				-1.9
3,736,709	+				-2.1
3,736,709	+				-1.1
3,736,710	-				-0.7
3,736,710	-				-0.9