Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3274

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,662,272	+		Pf1N1B4_3271	0.87	+0.7
3,662,272	+		Pf1N1B4_3271	0.87	-0.9
3,662,272	+		Pf1N1B4_3271	0.87	-0.1
3,662,273	-		Pf1N1B4_3271	0.88	-0.6
3,662,273	-		Pf1N1B4_3271	0.88	+0.4
3,662,273	-		Pf1N1B4_3271	0.88	-2.4
3,662,314	-				-0.4
3,662,347	+				-1.1
3,662,347	+				-0.1
3,662,347	+				+1.1
3,662,347	+				+0.0
3,662,347	+				-0.1
3,662,347	+				-0.1
3,662,348	-				-0.4
3,662,348	-				+0.9
3,662,348	-				-0.6
3,662,348	-				+1.9
3,662,348	-				+1.1
3,662,348	-				+0.8
3,662,348	-				-0.6
3,662,348	-				-3.4
3,662,348	-				-0.6
3,662,460	-		Pf1N1B4_3272	0.20	+1.1
3,662,499	+		Pf1N1B4_3272	0.53	-0.7
3,662,707	+		Pf1N1B4_3273	0.28	-2.1
3,662,707	+		Pf1N1B4_3273	0.28	+0.9
3,662,708	-		Pf1N1B4_3273	0.29	+0.9
3,662,708	-		Pf1N1B4_3273	0.29	-1.1
3,662,708	-		Pf1N1B4_3273	0.29	-0.6
3,663,139	+				+1.6
3,663,139	+				-0.2
3,663,140	-				-1.8
3,663,140	-				+0.3
3,663,140	-				+0.9
3,663,140	-				+0.6
3,663,140	-				-0.5
3,663,156	-				+0.9
3,663,156	-				-0.9
3,663,162	+				+0.9
3,663,162	+				-0.8
3,663,163	-				-0.7
3,663,163	-				+0.2
3,663,163	-				+0.9
3,663,184	+				-1.1
3,663,184	+				+2.3
3,663,186	+				-1.4
3,663,186	+				-0.4
3,663,186	+				+0.9
3,663,186	+				-0.1
3,663,186	+				-1.4
3,663,187	-				+0.2
3,663,187	-				+0.3
3,663,187	-				+1.5
3,663,187	-				+0.6
3,663,187	-				-1.1
3,663,187	-				+0.9
3,663,191	+				+0.9
3,663,289	+		Pf1N1B4_3274	0.21	-0.3
3,663,289	+		Pf1N1B4_3274	0.21	+0.4
3,663,290	-		Pf1N1B4_3274	0.21	-0.7
3,663,290	-		Pf1N1B4_3274	0.21	-1.4
3,663,290	-		Pf1N1B4_3274	0.21	-0.8
3,663,315	+		Pf1N1B4_3274	0.27	+0.5
3,663,316	-		Pf1N1B4_3274	0.28	-3.0
3,663,387	+		Pf1N1B4_3274	0.45	-1.1
3,663,387	+		Pf1N1B4_3274	0.45	-1.1
3,663,388	-		Pf1N1B4_3274	0.45	-1.1
3,663,502	-		Pf1N1B4_3274	0.72	-1.1
3,663,502	-				-0.7
3,663,586	-				-0.4
3,663,640	+				+0.5
3,663,640	+				-0.7
3,663,640	+				+0.2
3,663,641	-				+1.7
3,663,641	-				-0.7
3,663,727	+				-0.2
3,663,727	+				+0.9
3,663,727	+				+1.1
3,663,728	-				-0.1
3,663,728	-				+0.1
3,663,866	+		Pf1N1B4_3275	0.29	-1.4
3,663,925	+		Pf1N1B4_3275	0.38	-1.1
3,663,925	+		Pf1N1B4_3275	0.38	-0.4
3,663,926	-		Pf1N1B4_3275	0.38	-0.1
3,664,072	-		Pf1N1B4_3275	0.61	+1.7
3,664,072	-		Pf1N1B4_3275	0.61	-0.1
3,664,162	+		Pf1N1B4_3275	0.75	+0.3
3,664,167	+		Pf1N1B4_3275	0.76	+0.6
3,664,175	+		Pf1N1B4_3275	0.77	-0.2
3,664,176	-		Pf1N1B4_3275	0.77	-0.1
3,664,210	+		Pf1N1B4_3275	0.83	+0.1
3,664,211	-		Pf1N1B4_3275	0.83	+0.7
3,664,211	-		Pf1N1B4_3275	0.83	+1.7
3,664,211	-		Pf1N1B4_3275	0.83	-1.2
3,664,211	-				-1.1
3,664,251	-		Pf1N1B4_3275	0.89	+0.9
3,664,346	+				-1.1
3,664,346	+				-1.9
3,664,347	-				-1.1
3,664,347	-				-0.7
3,664,347	-				+0.8
3,664,347	-				+0.3
3,664,365	+				+0.7
3,664,366	-				-0.9
3,664,456	+				-2.4
3,664,456	+				+0.3
3,664,456	+				+0.6
3,664,456	+				-0.3
3,664,457	-				+0.4
3,664,457	-				-0.3
3,664,495	-				-1.1
3,664,511	+		Pf1N1B4_3277	0.10	+1.5
3,664,512	-				+0.9
3,664,589	+		Pf1N1B4_3277	0.16	-0.1
3,664,589	+		Pf1N1B4_3277	0.16	+1.7
3,664,590	-		Pf1N1B4_3277	0.16	-1.4
3,664,590	-		Pf1N1B4_3277	0.16	+0.5