Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3132

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,516,324	+		Pf1N1B4_3131	0.31	-1.3
3,516,324	+		Pf1N1B4_3131	0.31	+1.0
3,516,324	+		Pf1N1B4_3131	0.31	+0.2
3,516,325	-		Pf1N1B4_3131	0.31	+0.3
3,516,325	-		Pf1N1B4_3131	0.31	+0.4
3,516,465	-		Pf1N1B4_3131	0.45	+1.0
3,516,465	-		Pf1N1B4_3131	0.45	+0.1
3,516,585	+		Pf1N1B4_3131	0.56	+2.3
3,516,585	+		Pf1N1B4_3131	0.56	-0.2
3,516,586	-		Pf1N1B4_3131	0.56	-0.2
3,516,617	-		Pf1N1B4_3131	0.59	+1.0
3,516,669	+		Pf1N1B4_3131	0.64	-0.1
3,516,669	+				+0.0
3,516,669	+		Pf1N1B4_3131	0.64	+0.0
3,516,669	+		Pf1N1B4_3131	0.64	-2.2
3,516,669	+		Pf1N1B4_3131	0.64	+0.0
3,516,670	-		Pf1N1B4_3131	0.64	+0.0
3,516,670	-		Pf1N1B4_3131	0.64	-1.4
3,516,670	-		Pf1N1B4_3131	0.64	-1.0
3,516,670	-		Pf1N1B4_3131	0.64	-0.3
3,516,670	-		Pf1N1B4_3131	0.64	+0.9
3,516,735	+				+0.0
3,516,735	+		Pf1N1B4_3131	0.71	+0.3
3,516,735	+		Pf1N1B4_3131	0.71	-1.0
3,516,736	-		Pf1N1B4_3131	0.71	+1.8
3,516,736	-		Pf1N1B4_3131	0.71	+1.5
3,516,736	-		Pf1N1B4_3131	0.71	+0.3
3,516,736	-		Pf1N1B4_3131	0.71	+0.5
3,516,769	+		Pf1N1B4_3131	0.74	-0.4
3,516,769	+		Pf1N1B4_3131	0.74	-0.8
3,516,769	+		Pf1N1B4_3131	0.74	+1.9
3,516,769	+		Pf1N1B4_3131	0.74	+0.0
3,516,769	+				+1.0
3,516,770	-		Pf1N1B4_3131	0.74	+2.2
3,516,770	-		Pf1N1B4_3131	0.74	-1.0
3,516,770	-		Pf1N1B4_3131	0.74	-0.6
3,516,770	-		Pf1N1B4_3131	0.74	+1.8
3,516,804	+		Pf1N1B4_3131	0.77	+1.0
3,516,805	-		Pf1N1B4_3131	0.77	+1.5
3,516,805	-		Pf1N1B4_3131	0.77	-1.1
3,516,838	+		Pf1N1B4_3131	0.81	+0.7
3,517,028	-				+0.6
3,517,028	-				-0.4
3,517,028	-				+0.0
3,517,028	-				-1.0
3,517,028	-				+1.3
3,517,028	-				+0.2
3,517,038	+				-0.3
3,517,038	+				+0.6
3,517,038	+				-1.7
3,517,038	+				+1.0
3,517,039	-				-1.8
3,517,039	-				+1.0
3,517,039	-				+0.9
3,517,349	+		Pf1N1B4_3132	0.54	-1.8
3,517,349	+		Pf1N1B4_3132	0.54	-1.8
3,517,349	+		Pf1N1B4_3132	0.54	-1.2
3,517,350	-		Pf1N1B4_3132	0.54	-0.5
3,517,350	-		Pf1N1B4_3132	0.54	-0.6
3,517,526	+		Pf1N1B4_3132	0.83	+1.0
3,517,527	-		Pf1N1B4_3132	0.83	-1.0
3,517,619	+				-0.5
3,517,619	+				-0.2
3,517,619	+				+2.6
3,517,619	+				+1.7
3,517,619	+				-1.3
3,517,619	+				+0.3
3,517,620	-				-0.3
3,517,620	-				+2.4
3,517,620	-				-0.7
3,517,620	-				+2.6
3,517,620	-				+1.7
3,517,813	+				+2.0
3,517,813	+		Pf1N1B4_3133	0.15	+0.0
3,517,813	+		Pf1N1B4_3133	0.15	-1.3
3,517,813	+		Pf1N1B4_3133	0.15	+1.0
3,517,814	-		Pf1N1B4_3133	0.15	-0.3
3,518,090	-				+1.0
3,518,131	+		Pf1N1B4_3133	0.43	-0.3
3,518,131	+		Pf1N1B4_3133	0.43	-0.3
3,518,131	+		Pf1N1B4_3133	0.43	+0.0
3,518,131	+		Pf1N1B4_3133	0.43	-0.7
3,518,131	+		Pf1N1B4_3133	0.43	+0.2
3,518,131	+		Pf1N1B4_3133	0.43	-0.6
3,518,131	+		Pf1N1B4_3133	0.43	-0.4
3,518,132	-		Pf1N1B4_3133	0.43	+1.8
3,518,152	+		Pf1N1B4_3133	0.45	-1.6
3,518,152	+		Pf1N1B4_3133	0.45	+0.2
3,518,152	+		Pf1N1B4_3133	0.45	-0.1
3,518,152	+		Pf1N1B4_3133	0.45	+0.1
3,518,152	+		Pf1N1B4_3133	0.45	-1.0
3,518,152	+		Pf1N1B4_3133	0.45	+0.0
3,518,152	+		Pf1N1B4_3133	0.45	+0.4
3,518,153	-		Pf1N1B4_3133	0.45	-0.6
3,518,290	+				-0.6
3,518,291	-		Pf1N1B4_3133	0.57	+0.3
3,518,291	-		Pf1N1B4_3133	0.57	+1.6
3,518,344	+		Pf1N1B4_3133	0.61	+1.6
3,518,344	+		Pf1N1B4_3133	0.61	-2.3
3,518,345	-		Pf1N1B4_3133	0.61	+0.2
3,518,345	-		Pf1N1B4_3133	0.61	+1.0
3,518,461	+		Pf1N1B4_3133	0.72	+0.3
3,518,461	+		Pf1N1B4_3133	0.72	+0.4
3,518,541	+		Pf1N1B4_3133	0.79	-1.0
3,518,548	-		Pf1N1B4_3133	0.79	-0.3
3,518,627	-		Pf1N1B4_3133	0.86	-0.2