Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2955

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,309,006	-		Pf1N1B4_2954	0.64	-0.2
3,309,356	+				-0.7
3,309,357	-				+0.3
3,309,397	+				+0.9
3,309,397	+				+0.1
3,309,398	-				+0.3
3,309,398	-				-1.9
3,309,443	+				+0.5
3,309,443	+				+1.4
3,309,443	+				+0.6
3,309,444	-				-0.2
3,309,481	+				+0.8
3,309,481	+				-0.4
3,309,481	+				+0.9
3,309,482	-				+0.1
3,309,527	+				+0.1
3,309,528	-				-0.8
3,309,539	+				-0.9
3,309,539	+				-0.3
3,309,540	-				+0.5
3,309,624	+				+1.5
3,309,625	-				-0.9
3,309,625	-				+0.5
3,309,625	-				+1.5
3,309,625	-				+0.6
3,309,625	-				-0.5
3,309,625	-				-0.4
3,309,864	+		Pf1N1B4_2955	0.39	-0.0
3,309,873	+		Pf1N1B4_2955	0.40	+1.8
3,309,873	+		Pf1N1B4_2955	0.40	+1.1
3,309,873	+		Pf1N1B4_2955	0.40	+0.9
3,309,873	+		Pf1N1B4_2955	0.40	+2.3
3,309,873	+		Pf1N1B4_2955	0.40	+1.0
3,309,874	-		Pf1N1B4_2955	0.40	-0.7
3,309,874	-		Pf1N1B4_2955	0.40	+1.1
3,310,086	+		Pf1N1B4_2955	0.74	+0.7
3,310,086	+		Pf1N1B4_2955	0.74	-0.2
3,310,087	-		Pf1N1B4_2955	0.74	-0.1
3,310,087	-		Pf1N1B4_2955	0.74	+0.8
3,310,087	-		Pf1N1B4_2955	0.74	+0.1
3,310,087	-		Pf1N1B4_2955	0.74	+0.1
3,310,259	+				+0.8
3,310,259	+				+0.3
3,310,259	+				+0.2
3,310,259	+				-0.3
3,310,259	+				-1.1
3,310,260	-				+0.1
3,310,382	+				+1.1
3,310,382	+				-0.2
3,310,382	+				-0.9
3,310,382	+				+0.1
3,310,382	+				-0.9
3,310,383	-				+0.7
3,310,383	-				-0.9
3,310,383	-				+0.5
3,310,383	-				+0.0
3,310,383	-				+2.1
3,310,383	-				-0.7
3,310,383	-				+0.2
3,310,383	-				-1.7
3,310,383	-				-2.5
3,310,383	-				-1.1
3,310,383	-				-0.3
3,310,478	-				-0.4
3,310,478	-				-0.2
3,310,478	-				-2.1
3,310,478	-				+0.4
3,310,486	+				+1.7
3,310,486	+				+1.1
3,310,486	+				+0.5
3,310,486	+				+0.9
3,310,486	+				+0.3
3,310,487	-				+2.4
3,310,487	-				-1.7
3,310,487	-				+1.7
3,310,487	-				+2.1
3,310,492	+				+0.1
3,310,493	-				+0.7
3,310,528	+				+0.3
3,310,528	+				+0.1
3,310,528	+				-1.1
3,310,528	+				-0.1
3,310,528	+				+2.3
3,310,529	-				-0.7
3,310,529	-				+0.0
3,310,529	-				-0.5
3,310,529	-				+3.4
3,310,529	-				+1.1
3,310,569	-				+1.4
3,310,640	+				+0.1
3,310,853	+		Pf1N1B4_2957	0.25	+0.1
3,310,853	+		Pf1N1B4_2957	0.25	-0.7
3,310,853	+		Pf1N1B4_2957	0.25	+0.5
3,310,913	+		Pf1N1B4_2957	0.29	-1.2
3,310,913	+		Pf1N1B4_2957	0.29	+0.2
3,310,913	+		Pf1N1B4_2957	0.29	+1.1
3,310,913	+		Pf1N1B4_2957	0.29	+0.7
3,310,914	-		Pf1N1B4_2957	0.30	-1.5
3,310,914	-				+1.4
3,311,012	+		Pf1N1B4_2957	0.37	+0.3
3,311,013	-		Pf1N1B4_2957	0.37	-0.1
3,311,013	-		Pf1N1B4_2957	0.37	-0.1
3,311,045	+		Pf1N1B4_2957	0.40	-1.5
3,311,046	-		Pf1N1B4_2957	0.40	+0.3
3,311,090	+		Pf1N1B4_2957	0.43	-1.9
3,311,090	+		Pf1N1B4_2957	0.43	-0.5
3,311,090	+		Pf1N1B4_2957	0.43	+0.6
3,311,091	-		Pf1N1B4_2957	0.43	+0.4
3,311,126	+		Pf1N1B4_2957	0.46	+0.4
3,311,126	+		Pf1N1B4_2957	0.46	+2.1
3,311,126	+		Pf1N1B4_2957	0.46	+1.9
3,311,127	-		Pf1N1B4_2957	0.46	+0.5
3,311,127	-		Pf1N1B4_2957	0.46	+1.9
3,311,222	+		Pf1N1B4_2957	0.53	-0.4
3,311,222	+		Pf1N1B4_2957	0.53	+0.3
3,311,222	+		Pf1N1B4_2957	0.53	+0.5
3,311,222	+		Pf1N1B4_2957	0.53	+0.1
3,311,222	+		Pf1N1B4_2957	0.53	+0.7
3,311,222	+		Pf1N1B4_2957	0.53	+0.1
3,311,222	+		Pf1N1B4_2957	0.53	-0.2
3,311,222	+		Pf1N1B4_2957	0.53	-0.1
3,311,222	+		Pf1N1B4_2957	0.53	-0.1
3,311,222	+		Pf1N1B4_2957	0.53	-1.5
3,311,222	+		Pf1N1B4_2957	0.53	+0.1
3,311,223	-		Pf1N1B4_2957	0.53	+1.1
3,311,223	-		Pf1N1B4_2957	0.53	-0.5
3,311,223	-		Pf1N1B4_2957	0.53	-1.7
3,311,223	-		Pf1N1B4_2957	0.53	+0.1
3,311,223	-		Pf1N1B4_2957	0.53	+2.4
3,311,223	-		Pf1N1B4_2957	0.53	-0.5
3,311,223	-		Pf1N1B4_2957	0.53	+1.1
3,311,223	-		Pf1N1B4_2957	0.53	-1.7
3,311,223	-		Pf1N1B4_2957	0.53	+0.5
3,311,223	-		Pf1N1B4_2957	0.53	-0.5
3,311,223	-		Pf1N1B4_2957	0.53	+1.1
3,311,223	-		Pf1N1B4_2957	0.53	+1.3