Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2547

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,890,327	+		Pf1N1B4_2546	0.69	-1.0
2,890,327	+		Pf1N1B4_2546	0.69	-0.4
2,890,327	+		Pf1N1B4_2546	0.69	+0.5
2,890,327	+		Pf1N1B4_2546	0.69	+0.2
2,890,327	+		Pf1N1B4_2546	0.69	-0.2
2,890,327	+		Pf1N1B4_2546	0.69	+0.6
2,890,447	+		Pf1N1B4_2546	0.76	+0.5
2,890,447	+		Pf1N1B4_2546	0.76	-1.2
2,890,447	+		Pf1N1B4_2546	0.76	+0.2
2,890,447	+		Pf1N1B4_2546	0.76	+0.5
2,890,447	+		Pf1N1B4_2546	0.76	+0.9
2,890,447	+		Pf1N1B4_2546	0.76	-2.0
2,890,447	+		Pf1N1B4_2546	0.76	+2.5
2,890,447	+		Pf1N1B4_2546	0.76	+0.6
2,890,447	+		Pf1N1B4_2546	0.76	-0.9
2,890,448	-		Pf1N1B4_2546	0.76	-0.9
2,890,448	-		Pf1N1B4_2546	0.76	-0.4
2,890,448	-		Pf1N1B4_2546	0.76	-0.1
2,890,448	-		Pf1N1B4_2546	0.76	+0.4
2,890,448	-		Pf1N1B4_2546	0.76	+0.5
2,890,448	-		Pf1N1B4_2546	0.76	+0.2
2,890,450	+		Pf1N1B4_2546	0.76	-0.1
2,890,450	+		Pf1N1B4_2546	0.76	-1.7
2,890,450	+		Pf1N1B4_2546	0.76	-0.1
2,890,450	+		Pf1N1B4_2546	0.76	-2.0
2,890,451	-		Pf1N1B4_2546	0.76	+0.1
2,890,451	-		Pf1N1B4_2546	0.76	-0.6
2,890,451	-		Pf1N1B4_2546	0.76	-0.2
2,890,493	-		Pf1N1B4_2546	0.78	-0.5
2,890,612	-				+0.2
2,890,714	+		Pf1N1B4_2546	0.90	+0.7
2,890,715	-		Pf1N1B4_2546	0.90	+0.2
2,890,925	-				+0.0
2,890,928	+				-0.8
2,890,928	+				+1.2
2,890,928	+				+0.6
2,890,929	-				-0.4
2,890,929	-				+0.2
2,890,939	+				+0.6
2,890,940	-				-0.1
2,890,954	+				-1.1
2,890,955	-				-0.0
2,891,026	+				-0.4
2,891,046	+				-0.0
2,891,046	+				+1.4
2,891,046	+				+0.8
2,891,046	+				-1.8
2,891,046	+				-1.2
2,891,046	+				-1.3
2,891,046	+				+0.5
2,891,046	+				-1.6
2,891,047	-				+0.8
2,891,047	-				-1.0
2,891,047	-				-1.8
2,891,047	-				+1.8
2,891,047	-				+1.2
2,891,051	+				-0.0
2,891,051	+				-0.8
2,891,051	+				+0.3
2,891,051	+				+0.5
2,891,052	-				+1.6
2,891,052	-				+0.1
2,891,052	-				+1.4
2,891,052	-				+0.8
2,891,052	-				+1.4
2,891,066	+				-0.4
2,891,066	+				+1.2
2,891,066	+				-0.3
2,891,066	+				-1.4
2,891,067	-				+0.6
2,891,067	-				+0.2
2,891,067	-				+0.5
2,891,067	-				+1.9
2,891,067	-				-0.6
2,891,067	-				+0.2
2,891,265	+				-1.4
2,891,287	-				-0.3
2,891,342	-				+2.1
2,891,342	-				+1.9
2,891,342	-				+0.9
2,891,352	+				+0.6
2,891,352	+				+1.7
2,891,353	-				-0.4
2,891,353	-				+0.2
2,891,356	+				-0.5
2,891,356	+				+2.2
2,891,356	+				-0.1
2,891,356	+				+0.5
2,891,356	+				+0.2
2,891,357	-				+1.4
2,891,372	-				+0.8
2,891,372	-				+0.6
2,891,500	-		Pf1N1B4_2547	0.30	+2.4
2,891,625	+		Pf1N1B4_2547	0.51	+1.2
2,891,625	+		Pf1N1B4_2547	0.51	-0.3
2,891,625	+		Pf1N1B4_2547	0.51	+2.8
2,891,626	-		Pf1N1B4_2547	0.52	+1.0
2,891,626	-		Pf1N1B4_2547	0.52	+2.2
2,891,632	-		Pf1N1B4_2547	0.53	-2.1
2,891,847	+		Pf1N1B4_2547	0.89	+0.6
2,891,847	+		Pf1N1B4_2547	0.89	-0.7
2,891,847	+		Pf1N1B4_2547	0.89	+1.5
2,891,847	+		Pf1N1B4_2547	0.89	-2.4
2,891,949	+				+0.2
2,892,075	+		Pf1N1B4_2548	0.14	-1.0
2,892,312	+		Pf1N1B4_2548	0.37	+0.8
2,892,312	+		Pf1N1B4_2548	0.37	+0.8
2,892,312	+		Pf1N1B4_2548	0.37	-0.8
2,892,313	-		Pf1N1B4_2548	0.37	-0.4
2,892,313	-		Pf1N1B4_2548	0.37	-0.1
2,892,313	-		Pf1N1B4_2548	0.37	-0.4
2,892,313	-		Pf1N1B4_2548	0.37	-0.4
2,892,313	-		Pf1N1B4_2548	0.37	+1.3
2,892,316	+		Pf1N1B4_2548	0.37	-0.9
2,892,316	+		Pf1N1B4_2548	0.37	-0.5
2,892,316	+		Pf1N1B4_2548	0.37	-0.0
2,892,316	+		Pf1N1B4_2548	0.37	-0.8
2,892,316	+		Pf1N1B4_2548	0.37	-1.1
2,892,317	-		Pf1N1B4_2548	0.38	+1.0
2,892,317	-		Pf1N1B4_2548	0.38	-0.2
2,892,317	-		Pf1N1B4_2548	0.38	+0.7
2,892,317	-		Pf1N1B4_2548	0.38	-0.6
2,892,396	+		Pf1N1B4_2548	0.45	-0.2
2,892,397	-		Pf1N1B4_2548	0.45	-0.9
2,892,816	+		Pf1N1B4_2548	0.85	+1.2
2,892,816	+		Pf1N1B4_2548	0.85	-1.0
2,892,817	-		Pf1N1B4_2548	0.85	+0.1
2,892,835	+		Pf1N1B4_2548	0.87	+0.1
2,892,835	+		Pf1N1B4_2548	0.87	-2.3
2,892,836	-		Pf1N1B4_2548	0.87	-0.4