Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2480

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
2,812,925	+				-0.8
2,812,925	+				+1.5
2,812,926	-				-1.1
2,812,931	+				+0.9
2,812,931	+				+0.8
2,812,931	+				+0.4
2,812,931	+				-0.6
2,812,932	-				+1.8
2,813,017	-				+0.9
2,813,128	+				-0.9
2,813,128	+				-1.6
2,813,128	+				-1.4
2,813,128	+				+1.2
2,813,129	-				+1.2
2,813,129	-				+0.7
2,813,129	-				-1.1
2,813,129	-				-0.3
2,813,129	-				+0.2
2,813,129	-				-2.1
2,813,129	-				+0.0
2,813,129	-				-1.1
2,813,130	+				-0.3
2,813,130	+				+1.1
2,813,130	+				-1.6
2,813,130	+				+2.2
2,813,130	+				+1.1
2,813,130	+				+0.4
2,813,130	+				-0.5
2,813,130	+				-0.4
2,813,130	+				+0.8
2,813,131	-				+0.2
2,813,131	-				+0.2
2,813,131	-				+1.2
2,813,131	-				-0.2
2,813,131	-				+1.1
2,813,131	-				-0.8
2,813,131	-				+0.4
2,813,131	-				+1.1
2,813,143	-				-0.2
2,813,143	-				+1.6
2,813,188	-				-1.4
2,813,339	+		Pf1N1B4_2479	0.32	-0.6
2,813,352	+		Pf1N1B4_2479	0.34	+1.2
2,813,353	-		Pf1N1B4_2479	0.34	-1.4
2,813,541	+		Pf1N1B4_2479	0.71	-0.6
2,813,541	+		Pf1N1B4_2479	0.71	-0.4
2,813,542	-		Pf1N1B4_2479	0.71	-0.8
2,813,699	-				+0.5
2,813,707	+				+0.0
2,813,709	+				+0.2
2,813,709	+				+0.2
2,813,709	+				-1.5
2,813,709	+				+0.2
2,813,710	-				+0.1
2,813,710	-				-0.4
2,813,710	-				+1.8
2,813,929	-				+1.2
2,813,948	-				-1.1
2,813,948	-				-2.4
2,813,969	+				+0.6
2,813,969	+				+0.2
2,813,969	+				+1.2
2,813,970	-				-1.8
2,814,056	-		Pf1N1B4_2480	0.17	+1.0
2,814,056	-		Pf1N1B4_2480	0.17	+0.1
2,814,056	-		Pf1N1B4_2480	0.17	+1.2
2,814,079	+		Pf1N1B4_2480	0.19	+0.2
2,814,079	+		Pf1N1B4_2480	0.19	+2.0
2,814,080	-		Pf1N1B4_2480	0.19	-0.5
2,814,305	-				+0.2
2,814,305	-		Pf1N1B4_2480	0.45	+0.2
2,814,305	-		Pf1N1B4_2480	0.45	-0.3
2,814,363	+		Pf1N1B4_2480	0.51	-0.8
2,814,364	-		Pf1N1B4_2480	0.51	+1.9
2,814,364	-		Pf1N1B4_2480	0.51	-0.8
2,814,475	+		Pf1N1B4_2480	0.64	+0.4
2,814,475	+		Pf1N1B4_2480	0.64	-0.7
2,814,475	+		Pf1N1B4_2480	0.64	+0.2
2,814,475	+		Pf1N1B4_2480	0.64	-0.4
2,814,475	+		Pf1N1B4_2480	0.64	-0.2
2,814,476	-		Pf1N1B4_2480	0.64	+0.2
2,814,476	-		Pf1N1B4_2480	0.64	+1.6
2,814,476	-		Pf1N1B4_2480	0.64	-0.8
2,814,476	-		Pf1N1B4_2480	0.64	+0.2
2,814,476	-		Pf1N1B4_2480	0.64	-0.1
2,814,476	-		Pf1N1B4_2480	0.64	-1.1
2,814,476	-		Pf1N1B4_2480	0.64	-1.1
2,814,479	-		Pf1N1B4_2480	0.64	+0.7
2,814,526	+		Pf1N1B4_2480	0.70	+0.5
2,814,526	+		Pf1N1B4_2480	0.70	-0.8
2,814,526	+		Pf1N1B4_2480	0.70	+0.2
2,814,526	+		Pf1N1B4_2480	0.70	+1.0
2,814,526	+		Pf1N1B4_2480	0.70	-2.1
2,814,526	+		Pf1N1B4_2480	0.70	+0.8
2,814,526	+		Pf1N1B4_2480	0.70	+0.1
2,814,526	+		Pf1N1B4_2480	0.70	-0.1
2,814,526	+		Pf1N1B4_2480	0.70	-0.4
2,814,526	+		Pf1N1B4_2480	0.70	-1.9
2,814,527	-				+0.2
2,814,527	-		Pf1N1B4_2480	0.70	-1.1
2,814,527	-		Pf1N1B4_2480	0.70	-1.1
2,814,527	-		Pf1N1B4_2480	0.70	-1.8
2,814,527	-		Pf1N1B4_2480	0.70	-0.8
2,814,527	-		Pf1N1B4_2480	0.70	+0.2
2,814,527	-		Pf1N1B4_2480	0.70	-0.2
2,814,527	-		Pf1N1B4_2480	0.70	+0.8
2,814,527	-		Pf1N1B4_2480	0.70	+1.2
2,814,527	-		Pf1N1B4_2480	0.70	+1.0
2,814,527	-		Pf1N1B4_2480	0.70	+0.2
2,814,719	-				+0.2
2,814,719	-				-1.5
2,814,719	-				+0.4
2,814,719	-				+2.0
2,814,719	-				-1.1
2,814,719	-				+0.0
2,814,745	+				+0.6
2,814,745	+				-0.8
2,814,745	+				+0.8
2,814,745	+				-1.2
2,814,745	+				-1.1
2,814,746	-				+0.7
2,814,746	-				-0.8
2,814,746	-				+0.8
2,814,766	+				-0.1
2,814,809	-				+0.0
2,814,833	+				+1.2
2,814,833	+				+1.8
2,814,833	+				-0.6
2,814,833	+				-0.2
2,814,833	+				-0.8
2,814,833	+				-0.4
2,814,834	-				+0.2
2,814,834	-				-0.5
2,814,834	-				-0.2
2,814,834	-				+1.5
2,814,834	-				+1.2
2,814,834	-				-0.7
2,814,834	-				-1.4
2,814,834	-				+0.8
2,814,834	-				-0.8
2,814,834	-				+2.2
2,814,835	+				+0.2
2,814,835	+				+0.0
2,814,835	+				+1.0
2,814,835	+				+0.5
2,814,835	+				+1.6
2,814,835	+				+0.6
2,814,835	+				+1.6
2,814,835	+				-0.5
2,814,836	-				+0.5
2,814,836	-				+2.0
2,814,836	-				+1.0
2,814,836	-				+1.2
2,814,836	-				+0.7
2,814,836	-				+0.2
2,814,836	-				-0.4
2,814,836	-				+1.6
2,814,836	-				+2.5
2,814,836	-				+0.6
2,814,836	-				+0.8
2,814,836	-				+0.4
2,814,836	-				-0.8
2,814,856	-				-0.5
2,814,941	-				-0.9
2,814,959	-				+0.3
2,814,959	-				-1.1
2,815,106	-		Pf1N1B4_2481	0.15	+0.2
2,815,106	-		Pf1N1B4_2481	0.15	-0.4
2,815,106	-		Pf1N1B4_2481	0.15	-1.4
2,815,180	+		Pf1N1B4_2481	0.23	-0.0
2,815,180	+		Pf1N1B4_2481	0.23	+0.0
2,815,248	-		Pf1N1B4_2481	0.30	-0.3
2,815,248	-		Pf1N1B4_2481	0.30	-1.6
2,815,375	+		Pf1N1B4_2481	0.43	-1.1
2,815,375	+		Pf1N1B4_2481	0.43	-0.2
2,815,375	+		Pf1N1B4_2481	0.43	+1.2
2,815,375	+		Pf1N1B4_2481	0.43	+0.2
2,815,375	+		Pf1N1B4_2481	0.43	+3.2
2,815,375	+		Pf1N1B4_2481	0.43	-1.5
2,815,375	+		Pf1N1B4_2481	0.43	+0.2
2,815,376	-		Pf1N1B4_2481	0.43	-0.4
2,815,376	-		Pf1N1B4_2481	0.43	+0.5
2,815,574	-		Pf1N1B4_2481	0.63	+0.2